RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 MIGA2Q7L4E1 593 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 CHD1LQ86WJ1 897 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 RASAL3Q86YV0 1011 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 REM2Q8IYK8 340 aaPredicted RBP19.81■□□□□ 0.76
CTSD-205ENST00000438213 MIGA1Q8NAN2 632 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 OTUD7AQ8TE49 926 aaPredicted RBP19.81■□□□□ 0.76
CTSD-205ENST00000438213 TGFBRAP1Q8WUH2 860 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 BEGAINQ9BUH8 593 aa19.81■□□□□ 0.76
CTSD-205ENST00000438213 ZNF532Q9HCE3 1301 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 SSC5DA1L4H1 1573 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 MAGEB6P1A0A0J9YX57 407 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 DYNLL1P63167 89 aaKnown RBP19.8■□□□□ 0.76
CTSD-205ENST00000438213 NUCB1Q02818 461 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 LRRFIP1Q32MZ4 808 aaKnown RBP19.8■□□□□ 0.76
CTSD-205ENST00000438213 LNPKQ9C0E8 428 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.8■□□□□ 0.76
CTSD-205ENST00000438213 STAP2Q9UGK3 403 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 CSADQ9Y600 493 aa19.8■□□□□ 0.76
CTSD-205ENST00000438213 AK9Q5TCS8 1911 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 ADD2P35612 726 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 KIF23Q02241 960 aaPredicted RBP19.79■□□□□ 0.76
CTSD-205ENST00000438213 KBTBD3Q8NAB2 608 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 PI4K2BQ8TCG2 481 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 AIDAQ96BJ3 306 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 OSBPL5Q9H0X9 879 aaPredicted RBP19.79■□□□□ 0.76
CTSD-205ENST00000438213 DHX36Q9H2U1 1008 aaKnown RBP19.79■□□□□ 0.76
CTSD-205ENST00000438213 WBP1LQ9NX94 342 aa19.79■□□□□ 0.76
CTSD-205ENST00000438213 MYO5AQ9Y4I1 1855 aaKnown RBP19.79■□□□□ 0.76
CTSD-205ENST00000438213 DDTLA6NHG4 134 aaPredicted RBP19.78■□□□□ 0.76
CTSD-205ENST00000438213 USP5P45974 858 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 PDE1AP54750 535 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 UBE3CQ15386 1083 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 SH3BP5LQ7L8J4 393 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.78■□□□□ 0.76
CTSD-205ENST00000438213 CLMNQ96JQ2 1002 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 WRNIP1Q96S55 665 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 RFX7Q2KHR2 1363 aa19.78■□□□□ 0.76
CTSD-205ENST00000438213 TCRBV5S4A2TA0A5A2 114 aa19.77■□□□□ 0.76
CTSD-205ENST00000438213 CENPBP07199 599 aaPredicted RBP19.77■□□□□ 0.76
CTSD-205ENST00000438213 SPRYD7Q5W111 196 aa19.77■□□□□ 0.76
CTSD-205ENST00000438213 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.77■□□□□ 0.76
CTSD-205ENST00000438213 MAPKAPK5Q8IW41 473 aa19.77■□□□□ 0.76
CTSD-205ENST00000438213 CRNKL1Q9BZJ0 848 aaKnown RBP19.77■□□□□ 0.76
CTSD-205ENST00000438213 PI4KBQ9UBF8 816 aa19.77■□□□□ 0.76
CTSD-205ENST00000438213 ZNF112Q9UJU3 913 aa19.77■□□□□ 0.76
CTSD-205ENST00000438213 SALL3Q9BXA9 1300 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 MAST2Q6P0Q8 1798 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 ATRNL1Q5VV63 1379 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 TBC1D12O60347 775 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 ZFYP08048 801 aaPredicted RBP19.76■□□□□ 0.75
CTSD-205ENST00000438213 HSPA1AP0DMV8 641 aaKnown RBP19.76■□□□□ 0.75
CTSD-205ENST00000438213 HSPA1BP0DMV9 641 aaKnown RBP19.76■□□□□ 0.75
CTSD-205ENST00000438213 ZBTB48P10074 688 aaPredicted RBP19.76■□□□□ 0.75
CTSD-205ENST00000438213 MAP3K10Q02779 954 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 ZIC5Q96T25 663 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 RIOK1Q9BRS2 568 aaKnown RBP19.76■□□□□ 0.75
CTSD-205ENST00000438213 ELP3Q9H9T3 547 aa19.76■□□□□ 0.75
CTSD-205ENST00000438213 RNF113AO15541 343 aaKnown RBP19.75■□□□□ 0.75
CTSD-205ENST00000438213 VGLL4Q14135 290 aa19.75■□□□□ 0.75
CTSD-205ENST00000438213 FOXP4Q8IVH2 680 aaPredicted RBP19.75■□□□□ 0.75
CTSD-205ENST00000438213 WNK4Q96J92 1243 aa19.75■□□□□ 0.75
CTSD-205ENST00000438213 FLT1P17948 1338 aa19.75■□□□□ 0.75
CTSD-205ENST00000438213 DOCK2Q92608 1830 aa19.74■□□□□ 0.75
CTSD-205ENST00000438213 CA12O43570 354 aa19.74■□□□□ 0.75
CTSD-205ENST00000438213 INHBEP58166 350 aa19.74■□□□□ 0.75
CTSD-205ENST00000438213 MKRN3Q13064 507 aaKnown RBP19.74■□□□□ 0.75
CTSD-205ENST00000438213 ZKSCAN4Q969J2 545 aaPredicted RBP19.74■□□□□ 0.75
CTSD-205ENST00000438213 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.74■□□□□ 0.753e-9■■■■□ 25.5
CTSD-205ENST00000438213 COL2A1P02458 1487 aaPredicted RBP19.73■□□□□ 0.75
CTSD-205ENST00000438213 HLA-DOAP06340 250 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 NEFLP07196 543 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 SREBF2Q12772 1141 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 ERO1BQ86YB8 467 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 EVI5LQ96CN4 794 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 FSD1Q9BTV5 496 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 TRIM34Q9BYJ4 488 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 HERC5Q9UII4 1024 aaKnown RBP19.73■□□□□ 0.75
CTSD-205ENST00000438213 PALD1Q9ULE6 856 aa19.73■□□□□ 0.75
CTSD-205ENST00000438213 MANSC4A6NHS7 340 aaPredicted RBP19.72■□□□□ 0.75
CTSD-205ENST00000438213 CTNND1O60716 968 aaKnown RBP19.72■□□□□ 0.75
CTSD-205ENST00000438213 MBD4O95243 580 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 INPP5BP32019 993 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 TM4SF4P48230 202 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 TTC6Q86TZ1 520 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 PLEKHM2Q8IWE5 1019 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 OPTNQ96CV9 577 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 OSBPL3Q9H4L5 887 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 ARMT1Q9H993 441 aa19.72■□□□□ 0.75
CTSD-205ENST00000438213 SAP30BPQ9UHR5 308 aaKnown RBP19.72■□□□□ 0.75
CTSD-205ENST00000438213 PHF20L1A8MW92 1017 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 CTCFP49711 727 aaPredicted RBP19.71■□□□□ 0.75
CTSD-205ENST00000438213 SLFNL1Q499Z3 407 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 NOL9Q5SY16 702 aaKnown RBP19.71■□□□□ 0.75
CTSD-205ENST00000438213 TICAM2Q86XR7 235 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 LCORLQ8N3X6 602 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 CRACR2BQ8N4Y2 399 aaPredicted RBP19.71■□□□□ 0.75
CTSD-205ENST00000438213 APPBP2Q92624 585 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 DDRGK1Q96HY6 314 aa19.71■□□□□ 0.75
CTSD-205ENST00000438213 PICK1Q9NRD5 415 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms