RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 VAV3Q9UKW4 847 aa6.61□□□□□ -1.35
HMGB1P31-201ENST00000437242 CEACAM5P06731 702 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 AOC3Q16853 763 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 ATG4DQ86TL0 474 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 PDZD3Q86UT5 571 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 TOP6BLQ8N6T0 577 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 PI4K2BQ8TCG2 481 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 RBCK1Q9BYM8 510 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 MKNK2Q9HBH9 465 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 U3KQE9 123 aa6.6□□□□□ -1.35
HMGB1P31-201ENST00000437242 TMEM265A0A087WTH1 108 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 NEFMP07197 916 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 RNASE1P07998 156 aaKnown RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 ITIH2P19823 946 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 CD96P40200 585 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 ZNF648Q5T619 568 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 ANGEL2Q5VTE6 544 aaKnown RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 PI16Q6UXB8 463 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 C14orf37Q86TY3 774 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 CCER1Q8TC90 406 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 FAM168AQ92567 244 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 ISL2Q96A47 359 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 BCO2Q9BYV7 579 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 ADAMTS6Q9UKP5 1117 aa6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P31-201ENST00000437242 CARMIL2Q6F5E8 1435 aa6.59□□□□□ -1.36
HMGB1P31-201ENST00000437242 OXCT1P55809 520 aa6.58□□□□□ -1.36
HMGB1P31-201ENST00000437242 MAP1SQ66K74 1059 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P31-201ENST00000437242 ACSBG1Q96GR2 724 aa6.58□□□□□ -1.36
HMGB1P31-201ENST00000437242 EMILIN2Q9BXX0 1053 aa6.58□□□□□ -1.36
HMGB1P31-201ENST00000437242 AKAP2Q9Y2D5 859 aa6.58□□□□□ -1.36
HMGB1P31-201ENST00000437242 NME2P22392 152 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 ARNTP27540 789 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 ERVK-24P63145 666 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 ZC3H12AQ5D1E8 599 aaKnown RBP6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 LCE1DQ5T752 114 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 RNF214Q8ND24 703 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 LRRN4CLQ8ND94 238 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 STK35Q8TDR2 534 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 CBX8Q9HC52 389 aa6.57□□□□□ -1.36
HMGB1P31-201ENST00000437242 FARP2O94887 1054 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P31-201ENST00000437242 GPBAR1Q8TDU6 330 aa6.56□□□□□ -1.36
HMGB1P31-201ENST00000437242 PICK1Q9NRD5 415 aa6.56□□□□□ -1.36
HMGB1P31-201ENST00000437242 PLAGL2Q9UPG8 496 aa6.56□□□□□ -1.36
HMGB1P31-201ENST00000437242 PNMA6FA0A0J9YX94 578 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 SOWAHDA6NJG2 315 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 PDE4CQ08493 712 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 ZNF124Q15973 351 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 PKN1Q16512 942 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 TMC7Q7Z402 723 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 RETREG2Q8NC44 543 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 BIN2Q9UBW5 565 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
HMGB1P31-201ENST00000437242 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 TMEM40Q8WWA1 233 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 TNKS2Q9H2K2 1166 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 DCTN4Q9UJW0 460 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 SAMM50Q9Y512 469 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 SNX11Q9Y5W9 270 aa6.54□□□□□ -1.36
HMGB1P31-201ENST00000437242 ZNF252P-AS1Q0IIN9 211 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 IKZF1Q13422 519 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 KSR1Q8IVT5 923 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 ASB11Q8WXH4 323 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 PRDM10Q9NQV6 1147 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 CSADQ9Y600 493 aa6.53□□□□□ -1.36
HMGB1P31-201ENST00000437242 PPM1JQ5JR12 505 aa6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 TPTE2Q6XPS3 522 aa6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 FLAD1Q8NFF5 587 aa6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 HEXIM2Q96MH2 286 aaKnown RBP6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 NECAB3Q96P71 396 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 SLC38A3Q99624 504 aa6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 ARID3AQ99856 593 aa6.52□□□□□ -1.37
HMGB1P31-201ENST00000437242 DBX1A6NMT0 343 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 GNAT3A8MTJ3 354 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 IGF2BP3O00425 579 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 MAPK1P28482 360 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 GSTT1P30711 240 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 ENOX2Q16206 610 aaKnown RBP6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 CDC37L1Q7L3B6 337 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 C3orf58Q8NDZ4 430 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 CEP44Q9C0F1 390 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 PRDM7Q9NQW5 492 aa6.51□□□□□ -1.37
HMGB1P31-201ENST00000437242 TREHO43280 583 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 TRIM37O94972 964 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 PLCB3Q01970 1234 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 ZP2Q05996 745 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 DSC3Q14574 896 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 MPRIPQ6WCQ1 1025 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 SPACA3Q8IXA5 215 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
HMGB1P31-201ENST00000437242 PPM1HQ9ULR3 514 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms