RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 POTEFA5A3E0 1075 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 IRF6O14896 467 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 IL15P40933 162 aaPredicted RBP13.33□□□□□ -0.27
HMGCL-204ENST00000436439 ERO1BQ86YB8 467 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 FAM151AQ8WW52 585 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 EFCC1Q9HA90 598 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.27
HMGCL-204ENST00000436439 BRCA2P51587 3418 aa13.33□□□□□ -0.28
HMGCL-204ENST00000436439 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
HMGCL-204ENST00000436439 BTBD19C9JJ37 291 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 SMARCA5O60264 1052 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-204ENST00000436439 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
HMGCL-204ENST00000436439 TIMM10P62072 90 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 OS9Q13438 667 aaPredicted RBP13.32□□□□□ -0.28
HMGCL-204ENST00000436439 CCDC102BQ68D86 513 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 ZFPM1Q8IX07 1006 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 ZNF341Q9BYN7 854 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 ZFYVE28Q9HCC9 887 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 DENND2AQ9ULE3 1009 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 PHIPQ8WWQ0 1821 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 APBB1O00213 710 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 PPIL2Q13356 520 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 DCAF15Q66K64 600 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
HMGCL-204ENST00000436439 BACH2Q9BYV9 841 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 USP40Q9NVE5 1235 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 STAP2Q9UGK3 403 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 ZNF112Q9UJU3 913 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 PTPRFP10586 1907 aa13.32□□□□□ -0.28
HMGCL-204ENST00000436439 MKI67P46013 3256 aaKnown RBP13.31□□□□□ -0.28
HMGCL-204ENST00000436439 SEMA3EO15041 775 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 CETPP11597 493 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 TFCP2Q12800 502 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 RASGRF1Q13972 1273 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 HOOK2Q96ED9 719 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 ARHGAP39Q9C0H5 1083 aa13.31□□□□□ -0.28
HMGCL-204ENST00000436439 GNL3LQ9NVN8 582 aaKnown RBP13.31□□□□□ -0.28
HMGCL-204ENST00000436439 DOCK1Q14185 1865 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 ATRNL1Q5VV63 1379 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 MGAMO43451 1857 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 ZBTB22O15209 634 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 TLR2O60603 784 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 SLURP2P0DP57 97 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 PDE1AP54750 535 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 PPATQ06203 517 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 SNAPC2Q13487 334 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 BMP2KLQ5H9B9 411 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
HMGCL-204ENST00000436439 ARMC5Q96C12 935 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 XAGE2Q96GT9 111 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 IL1RAPL2Q9NP60 686 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 PTCH2Q9Y6C5 1203 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 GAKO14976 1311 aa13.3□□□□□ -0.28
HMGCL-204ENST00000436439 MYO5AQ9Y4I1 1855 aaKnown RBP13.29□□□□□ -0.28
HMGCL-204ENST00000436439 MX1P20591 662 aa13.29□□□□□ -0.28
HMGCL-204ENST00000436439 ANP32AP39687 249 aaKnown RBP13.29□□□□□ -0.28
HMGCL-204ENST00000436439 SH3BP5LQ7L8J4 393 aa13.29□□□□□ -0.28
HMGCL-204ENST00000436439 ZNF384Q8TF68 577 aa13.29□□□□□ -0.28
HMGCL-204ENST00000436439 ABCF2Q9UG63 623 aa13.29□□□□□ -0.28
HMGCL-204ENST00000436439 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
HMGCL-204ENST00000436439 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 EN2P19622 333 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 CTGFP29279 349 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 MOGSQ13724 837 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 NOL9Q5SY16 702 aaKnown RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 TTC22Q5TAA0 569 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 OTUD7AQ8TE49 926 aaPredicted RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 IDI2Q9BXS1 227 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 ZCCHC17Q9NP64 241 aaKnown RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 DDX4Q9NQI0 724 aaKnown RBP13.28□□□□□ -0.28
HMGCL-204ENST00000436439 KCNH4Q9UQ05 1017 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
HMGCL-204ENST00000436439 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 PHF20L1A8MW92 1017 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 LACTBP83111 547 aaPredicted RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 C17orf99Q6UX52 265 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 PI16Q6UXB8 463 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 ZGPATQ8N5A5 531 aaKnown RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 EAF2Q96CJ1 260 aaPredicted RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 ZNF333Q96JL9 665 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 AKAP2Q9Y2D5 859 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 PDS5AQ29RF7 1337 aaKnown RBP13.27□□□□□ -0.29
HMGCL-204ENST00000436439 ADGRA2Q96PE1 1338 aa13.27□□□□□ -0.29
HMGCL-204ENST00000436439 PDHXO00330 501 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 ENTPD3O75355 529 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 WDHD1O75717 1129 aaPredicted RBP13.26□□□□□ -0.29
HMGCL-204ENST00000436439 IFIT2P09913 472 aaKnown RBP13.26□□□□□ -0.29
HMGCL-204ENST00000436439 BTDP43251 543 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 ANKRD23Q86SG2 305 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 AACSQ86V21 672 aa13.26□□□□□ -0.29
HMGCL-204ENST00000436439 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
HMGCL-204ENST00000436439 GPATCH3Q96I76 525 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms