RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 HPS5Q9UPZ3 1129 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 FDPSP14324 419 aaKnown RBP12.78□□□□□ -0.36
LINC01516-201ENST00000436140 PLCD1P51178 756 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 TCP10Q12799 353 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 AOC3Q16853 763 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 RNF214Q8ND24 703 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 WDR66Q8TBY9 1149 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 MASTLQ96GX5 879 aa12.78□□□□□ -0.36
LINC01516-201ENST00000436140 CRNKL1Q9BZJ0 848 aaKnown RBP12.78□□□□□ -0.36
LINC01516-201ENST00000436140 TTF2Q9UNY4 1162 aaKnown RBP12.78□□□□□ -0.36
LINC01516-201ENST00000436140 SYCE3A1L190 88 aa12.77□□□□□ -0.36
LINC01516-201ENST00000436140 RAD21O60216 631 aa12.77□□□□□ -0.36
LINC01516-201ENST00000436140 IGDCC4Q8TDY8 1250 aa12.77□□□□□ -0.36
LINC01516-201ENST00000436140 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.36
LINC01516-201ENST00000436140 ERICH2A1L162 156 aa12.77□□□□□ -0.37
LINC01516-201ENST00000436140 GOLGA8AA7E2F4 631 aa12.77□□□□□ -0.37
LINC01516-201ENST00000436140 ZBTB43O43298 467 aa12.77□□□□□ -0.37
LINC01516-201ENST00000436140 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
LINC01516-201ENST00000436140 NOL10Q9BSC4 688 aaKnown RBP12.77□□□□□ -0.37
LINC01516-201ENST00000436140 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
LINC01516-201ENST00000436140 ALDH1B1P30837 517 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 HOXA10P31260 410 aaPredicted RBP12.76□□□□□ -0.37
LINC01516-201ENST00000436140 EIF6P56537 245 aaKnown RBP12.76□□□□□ -0.37
LINC01516-201ENST00000436140 WTAPQ15007 396 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 APOA5Q6Q788 366 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 CERS5Q8N5B7 392 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 FLAD1Q8NFF5 587 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 TMEM63CQ9P1W3 806 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 TNRC6CQ9HCJ0 1690 aaKnown RBP12.76□□□□□ -0.37
LINC01516-201ENST00000436140 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 SH2B2O14492 632 aaPredicted RBP12.76□□□□□ -0.37
LINC01516-201ENST00000436140 GNAT2P19087 354 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
LINC01516-201ENST00000436140 CAMK4Q16566 473 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 RASGRP2Q7LDG7 609 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 LY9Q9HBG7 655 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 MKNK2Q9HBH9 465 aa12.76□□□□□ -0.37
LINC01516-201ENST00000436140 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 GUCY1A2P33402 732 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 TEX11Q8IYF3 940 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 TNKSO95271 1327 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 SPTY2D1Q68D10 685 aaPredicted RBP12.75□□□□□ -0.37
LINC01516-201ENST00000436140 CPVLQ9H3G5 476 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
LINC01516-201ENST00000436140 ISY1Q9ULR0 285 aaKnown RBP12.75□□□□□ -0.37
LINC01516-201ENST00000436140 STX8Q9UNK0 236 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 TAF1LQ8IZX4 1826 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 GOLGA6L3A6NEY3 463 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 RAD17O75943 681 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 CLEC10AQ8IUN9 316 aa12.75□□□□□ -0.37
LINC01516-201ENST00000436140 GOLGA6L4A6NEF3 574 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 ZNF274Q96GC6 653 aaPredicted RBP12.74□□□□□ -0.37
LINC01516-201ENST00000436140 C8orf76Q96K31 380 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 ZNF277Q9NRM2 450 aaPredicted RBP12.74□□□□□ -0.37
LINC01516-201ENST00000436140 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.74□□□□□ -0.37
LINC01516-201ENST00000436140 KCNJ14Q9UNX9 436 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 IRS2Q9Y4H2 1338 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 RGL2O15211 777 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 PDCP20941 246 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 TFAP4Q01664 338 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 ATP2B2Q01814 1243 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 ESR2Q92731 530 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 KRT23Q9C075 422 aa12.74□□□□□ -0.37
LINC01516-201ENST00000436140 SEMA3EO15041 775 aa12.73□□□□□ -0.37
LINC01516-201ENST00000436140 BAG3O95817 575 aa12.73□□□□□ -0.37
LINC01516-201ENST00000436140 DPEP1P16444 411 aa12.73□□□□□ -0.37
LINC01516-201ENST00000436140 GNL2Q13823 731 aaKnown RBP12.73□□□□□ -0.37
LINC01516-201ENST00000436140 SART3Q15020 963 aaKnown RBP12.73□□□□□ -0.37
LINC01516-201ENST00000436140 ZBTB12Q9Y330 459 aaPredicted RBP12.73□□□□□ -0.37
LINC01516-201ENST00000436140 ALX1Q15699 326 aa12.73□□□□□ -0.37
LINC01516-201ENST00000436140 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
LINC01516-201ENST00000436140 ENAHQ8N8S7 591 aaPredicted RBP12.73□□□□□ -0.37
LINC01516-201ENST00000436140 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
LINC01516-201ENST00000436140 LY75O60449 1722 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 IARSP41252 1262 aaKnown RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 KLHL40Q2TBA0 621 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 ZSCAN23Q3MJ62 389 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 ERCC4Q92889 916 aaPredicted RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 AGXT2Q9BYV1 514 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 PPIP5K2O43314 1243 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 GOLGA8HP0CJ92 632 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 STAG1Q8WVM7 1258 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 RREB1Q92766 1687 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 NFIAQ12857 509 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 ZFPM1Q8IX07 1006 aa12.72□□□□□ -0.37
LINC01516-201ENST00000436140 ALDH8A1Q9H2A2 487 aaPredicted RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 RNF41Q9H4P4 317 aaPredicted RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 FAM217BQ9NTX9 383 aaPredicted RBP12.72□□□□□ -0.37
LINC01516-201ENST00000436140 KLRG2A4D1S0 409 aaPredicted RBP12.71□□□□□ -0.37
LINC01516-201ENST00000436140 PLEKHA8P1O95397 391 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms