RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CCDC152Q4G0S7 254 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SHC4Q6S5L8 630 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NFXL1Q6ZNB6 911 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 IFIT3O14879 490 aaKnown RBP18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MARCKSP29966 332 aaPredicted RBP18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 IMPACTQ9P2X3 320 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SLC12A7Q9Y666 1083 aa18.61■□□□□ 0.57
HLA-DQB2-231ENST00000435145 PRKCSHP14314 528 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB2-231ENST00000435145 RESP18Q5W5W9 173 aa18.6■□□□□ 0.57
HLA-DQB2-231ENST00000435145 LCORLQ8N3X6 602 aa18.6■□□□□ 0.57
HLA-DQB2-231ENST00000435145 C16orf45Q96MC5 204 aaPredicted RBP18.6■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MYL10Q9BUA6 226 aa18.6■□□□□ 0.57
HLA-DQB2-231ENST00000435145 CCDC69A6NI79 296 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SMTNL1A8MU46 457 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 PRKAB2O43741 272 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SYKP43405 635 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 RCAN1P53805 252 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 GSDMDP57764 484 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ZRSR1Q15695 479 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 MFSD6Q6ZSS7 791 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 IKBKBO14920 756 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 TNNT1P13805 278 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 BCAMP50895 628 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SSRP1Q08945 709 aaKnown RBP18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 WASF1Q92558 559 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NACAP1Q9BZK3 213 aa18.59■□□□□ 0.57
HLA-DQB2-231ENST00000435145 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ZNF804BA4D1E1 1349 aa18.58■□□□□ 0.57
HLA-DQB2-231ENST00000435145 SPATA31A1Q5TZJ5 1347 aa18.58■□□□□ 0.57
HLA-DQB2-231ENST00000435145 ROBO1Q9Y6N7 1651 aa18.58■□□□□ 0.57
HLA-DQB2-231ENST00000435145 LOC102724428A0A0B4J2F2 783 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CUTAO60888 179 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SKILP12757 684 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 IGHMBP2P38935 993 aaKnown RBP18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SIK1P57059 783 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ITPK1Q13572 414 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TRIM29Q14134 588 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ANKRD7Q92527 254 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 PAXBP1Q9Y5B6 917 aa18.58■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 NYAP1Q6ZVC0 841 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ELOA2Q8IYF1 753 aaPredicted RBP18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 FBXW7Q969H0 707 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 UBE2Q2LH0YL09 131 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CHRNDQ07001 517 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 FILIP1Q7Z7B0 1213 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 HSD3B7Q9H2F3 369 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SLC4A4Q9Y6R1 1079 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 COL4A1P02462 1669 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 KAT6BQ8WYB5 2073 aa18.57■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MYH14Q7Z406 1995 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 BIN1O00499 593 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MMP1P03956 469 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 GNL2Q13823 731 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SYCP1Q15431 976 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TPD52L1Q16890 204 aaPredicted RBP18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 NOSTRINQ8IVI9 506 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TDO2P48775 406 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TMTC2Q8N394 836 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ANAPC4Q9UJX5 808 aa18.56■□□□□ 0.56
HLA-DQB2-231ENST00000435145 USP27XA6NNY8 438 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 GUCY1A2P33402 732 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TPM4P67936 248 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 WTAPQ15007 396 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 SART3Q15020 963 aaKnown RBP18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 DDB1Q16531 1140 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 RTN1Q16799 776 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 MARCH10Q8NA82 808 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CCDC94Q9BW85 323 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 RNF41Q9H4P4 317 aaPredicted RBP18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 IFNKQ9P0W0 207 aa18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 NIP7Q9Y221 180 aaKnown RBP eCLIP18.55■□□□□ 0.56
HLA-DQB2-231ENST00000435145 KCNJ6P48051 423 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TOB1P50616 345 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 DHX8Q14562 1220 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 METTL16Q86W50 562 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CDC5LQ99459 802 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 FOXP1Q9H334 677 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 A0A1B0GUL6 1792 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 PPARAQ07869 468 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 STK11IPQ8N1F8 1099 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 KRI1Q8N9T8 703 aaKnown RBP18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CCDC150Q8NCX0 1101 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CLIC6Q96NY7 704 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 LRP2BPQ9P2M1 347 aa18.54■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CCDC196A0A1B0GTZ2 297 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 BTBD18B2RXH4 712 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 DEXIO95424 95 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 CEP135Q66GS9 1140 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 KRBA2Q6ZNG9 492 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 ADGRA1Q86SQ6 560 aa18.53■□□□□ 0.56
HLA-DQB2-231ENST00000435145 TRIM22Q8IYM9 498 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms