RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 MAGEB6Q8N7X4 407 aa17.31■□□□□ 0.36
LAMA4-208ENST00000431543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.31■□□□□ 0.36
LAMA4-208ENST00000431543 ELP3Q9H9T3 547 aa17.31■□□□□ 0.36
LAMA4-208ENST00000431543 AATFQ9NY61 560 aaKnown RBP eCLIP17.31■□□□□ 0.36
LAMA4-208ENST00000431543 ENTPD3O75355 529 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 GJA5P36382 358 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 DYNLL1P63167 89 aaKnown RBP17.3■□□□□ 0.36
LAMA4-208ENST00000431543 MAP3K9P80192 1104 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
LAMA4-208ENST00000431543 TSHZ3Q63HK5 1081 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
LAMA4-208ENST00000431543 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
LAMA4-208ENST00000431543 ZKSCAN4Q969J2 545 aaPredicted RBP17.3■□□□□ 0.36
LAMA4-208ENST00000431543 AK9Q5TCS8 1911 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
LAMA4-208ENST00000431543 ERC2O15083 957 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 HSPA8P11142 646 aaKnown RBP17.29■□□□□ 0.36
LAMA4-208ENST00000431543 MX1P20591 662 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 LBX1P52954 281 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 PPP4CP60510 307 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 VGLL4Q14135 290 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 ZSCAN29Q8IWY8 852 aaPredicted RBP17.29■□□□□ 0.36
LAMA4-208ENST00000431543 TEX11Q8IYF3 940 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 MIGA1Q8NAN2 632 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
LAMA4-208ENST00000431543 HAUS7Q99871 368 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 BEGAINQ9BUH8 593 aa17.29■□□□□ 0.36
LAMA4-208ENST00000431543 UNCXA6NJT0 531 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 INPP5BP32019 993 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 CTCFP49711 727 aaPredicted RBP17.28■□□□□ 0.36
LAMA4-208ENST00000431543 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 WNK4Q96J92 1243 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 WRNIP1Q96S55 665 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 NOL10Q9BSC4 688 aaKnown RBP17.28■□□□□ 0.36
LAMA4-208ENST00000431543 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 OTOFQ9HC10 1997 aa17.28■□□□□ 0.36
LAMA4-208ENST00000431543 TTC41PQ6P2S7 1318 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 BAG3O95817 575 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 CHGBP05060 677 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
LAMA4-208ENST00000431543 SLC9C2Q5TAH2 1124 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 DCAF15Q66K64 600 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 TGFBRAP1Q8WUH2 860 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 HOOK2Q96ED9 719 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 ZNF341Q9BYN7 854 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 PAG1Q9NWQ8 432 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 RNF186Q9NXI6 227 aa17.27■□□□□ 0.36
LAMA4-208ENST00000431543 MAST2Q6P0Q8 1798 aa17.27■□□□□ 0.35
LAMA4-208ENST00000431543 ATRNL1Q5VV63 1379 aa17.27■□□□□ 0.35
LAMA4-208ENST00000431543 DOCK2Q92608 1830 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
LAMA4-208ENST00000431543 TRPA1O75762 1119 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
LAMA4-208ENST00000431543 PDE6AP16499 860 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 TM4SF4P48230 202 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 MAPKAPK5Q8IW41 473 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 OSBPL5Q9H0X9 879 aaPredicted RBP17.26■□□□□ 0.35
LAMA4-208ENST00000431543 STAP2Q9UGK3 403 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
LAMA4-208ENST00000431543 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 FAM196BA6NMK8 535 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 PHF20L1A8MW92 1017 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 IGSF3O75054 1194 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
LAMA4-208ENST00000431543 PDE4AP27815 886 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 PDE1AP54750 535 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 PLEKHM2Q8IWE5 1019 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 CSADQ9Y600 493 aa17.25■□□□□ 0.35
LAMA4-208ENST00000431543 ZNF532Q9HCE3 1301 aa17.24■□□□□ 0.35
LAMA4-208ENST00000431543 ZBTB48P10074 688 aaPredicted RBP17.24■□□□□ 0.35
LAMA4-208ENST00000431543 PLCG2P16885 1265 aa17.24■□□□□ 0.35
LAMA4-208ENST00000431543 MAP3K10Q02779 954 aa17.24■□□□□ 0.35
LAMA4-208ENST00000431543 OTUD5Q96G74 571 aa17.24■□□□□ 0.35
LAMA4-208ENST00000431543 CA12O43570 354 aa17.23■□□□□ 0.35
LAMA4-208ENST00000431543 REM2Q8IYK8 340 aaPredicted RBP17.23■□□□□ 0.35
LAMA4-208ENST00000431543 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
LAMA4-208ENST00000431543 SAP30BPQ9UHR5 308 aaKnown RBP17.23■□□□□ 0.35
LAMA4-208ENST00000431543 FLT1P17948 1338 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 CDK5RAP2Q96SN8 1893 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 MAGEB6P1A0A0J9YX57 407 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 MANSC4A6NHS7 340 aaPredicted RBP17.22■□□□□ 0.35
LAMA4-208ENST00000431543 SPDYE5A6NIY4 337 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 TBC1D8O95759 1140 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 ADD2P35612 726 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 PTPN18Q99952 460 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 PRDM10Q9NQV6 1147 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 PALD1Q9ULE6 856 aa17.22■□□□□ 0.35
LAMA4-208ENST00000431543 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
LAMA4-208ENST00000431543 SREBF2Q12772 1141 aa17.21■□□□□ 0.35
LAMA4-208ENST00000431543 SLC4A8Q2Y0W8 1093 aa17.21■□□□□ 0.35
LAMA4-208ENST00000431543 ERO1BQ86YB8 467 aa17.21■□□□□ 0.35
LAMA4-208ENST00000431543 PI4K2BQ8TCG2 481 aa17.21■□□□□ 0.35
LAMA4-208ENST00000431543 R3HDMLQ9H3Y0 253 aa17.21■□□□□ 0.35
LAMA4-208ENST00000431543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms