RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 ZFPM1Q8IX07 1006 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 IDI2Q9BXS1 227 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZFYVE28Q9HCC9 887 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 RBBP6Q7Z6E9 1792 aaKnown RBP12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 CDK5RAP2Q96SN8 1893 aa12.51□□□□□ -0.41
HMGN1P38-201ENST00000431116 PTPRFP10586 1907 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 ENTPD3O75355 529 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 PICALMQ13492 652 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZSCAN29Q8IWY8 852 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 SSH3Q8TE77 659 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 RAI14Q9P0K7 980 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 ATAD5Q96QE3 1844 aa12.5□□□□□ -0.41
HMGN1P38-201ENST00000431116 KIAA0100Q14667 2235 aaKnown RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 PHIPQ8WWQ0 1821 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 BTBD19C9JJ37 291 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 SURF6O75683 361 aaKnown RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 UQCRFS1P1P0C7P4 283 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 MCAMP43121 646 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 MKRN4PQ13434 485 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 NOL9Q5SY16 702 aaKnown RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 FAM163AQ96GL9 167 aaPredicted RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 EFCC1Q9HA90 598 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 DDX4Q9NQI0 724 aaKnown RBP12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
HMGN1P38-201ENST00000431116 FOCADQ5VW36 1801 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 GSTO1P78417 241 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 CAP1Q01518 475 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 SH3BP5LQ7L8J4 393 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 NSUN4Q96CB9 384 aaKnown RBP12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 DBNDD2Q9BQY9 259 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZCCHC17Q9NP64 241 aaKnown RBP12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 GPR108Q9NPR9 543 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 PTPN22Q9Y2R2 807 aa12.48□□□□□ -0.41
HMGN1P38-201ENST00000431116 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 ZBTB7BO15156 539 aaPredicted RBP12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 TLR2O60603 784 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 LDHCP07864 332 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 RHBDL3P58872 404 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 CCDC158Q5M9N0 1113 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 PANK1Q8TE04 598 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 SNRKQ9NRH2 765 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
HMGN1P38-201ENST00000431116 COL2A1P02458 1487 aaPredicted RBP12.46□□□□□ -0.41
HMGN1P38-201ENST00000431116 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
HMGN1P38-201ENST00000431116 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.41
HMGN1P38-201ENST00000431116 ANKRD23Q86SG2 305 aa12.46□□□□□ -0.41
HMGN1P38-201ENST00000431116 PICK1Q9NRD5 415 aa12.46□□□□□ -0.41
HMGN1P38-201ENST00000431116 MGAMO43451 1857 aa12.46□□□□□ -0.42
HMGN1P38-201ENST00000431116 PDHXO00330 501 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 SLURP2P0DP57 97 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 ARHGEF6Q15052 776 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 CEP85Q6P2H3 762 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 ARHGAP39Q9C0H5 1083 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 TLR7Q9NYK1 1049 aaKnown RBP12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 NOP58Q9Y2X3 529 aaKnown RBP12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 ZHX2Q9Y6X8 837 aa12.45□□□□□ -0.42
HMGN1P38-201ENST00000431116 LOC285556D6RIA3 1793 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 FAM196BA6NMK8 535 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 CXCL11O14625 94 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 ECM2O94769 699 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 MAP4K4O95819 1239 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 PTPRAP18433 802 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 LACTBP83111 547 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 MOGSQ13724 837 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 KIF22Q14807 665 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 NAA16Q6N069 864 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 ARMC5Q96C12 935 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 PARK7Q99497 189 aaKnown RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 OSBPL5Q9H0X9 879 aaPredicted RBP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 AATFQ9NY61 560 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 CPA4Q9UI42 421 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 PTCH2Q9Y6C5 1203 aa12.44□□□□□ -0.42
HMGN1P38-201ENST00000431116 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 MYH1P12882 1939 aa12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 CTNND1O60716 968 aaKnown RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 CYP2E1P05181 493 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 MAP3K10Q02779 954 aa12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 ADGRA1Q86SQ6 560 aa12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 ZNF512BQ96KM6 892 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 CCDC8Q9H0W5 538 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.43□□□□□ -0.42
HMGN1P38-201ENST00000431116 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms