RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 USP21Q9UK80 565 aa16.27■□□□□ 0.19
RBM39-212ENST00000429968 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
RBM39-212ENST00000429968 ZBTB43O43298 467 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 TXNRD3Q86VQ6 643 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 C17orf53Q8N3J3 647 aaPredicted RBP16.26■□□□□ 0.19
RBM39-212ENST00000429968 STAG1Q8WVM7 1258 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 TFCP2L1Q9NZI6 479 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 RAI14Q9P0K7 980 aa16.26■□□□□ 0.19
RBM39-212ENST00000429968 GOLGA8AA7E2F4 631 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
RBM39-212ENST00000429968 MFSD6Q6ZSS7 791 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
RBM39-212ENST00000429968 JAG2Q9Y219 1238 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 DUOX1Q9NRD9 1551 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 NDUFA8P51970 172 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 KRT40Q6A162 431 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
RBM39-212ENST00000429968 TOMM22Q9NS69 142 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 MROH7-TTC4A0A0A0MT08 1334 aa16.25■□□□□ 0.19
RBM39-212ENST00000429968 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 MINDY4BA8MYZ0 360 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 TM4SF1P30408 202 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 PPARAQ07869 468 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 RC3H1Q5TC82 1133 aaKnown RBP16.24■□□□□ 0.19
RBM39-212ENST00000429968 ATL3Q6DD88 541 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 NBPF5PQ86XG9 351 aaPredicted RBP16.24■□□□□ 0.19
RBM39-212ENST00000429968 FMR1NBQ8N0W7 255 aaPredicted RBP16.24■□□□□ 0.19
RBM39-212ENST00000429968 SPC24Q8NBT2 197 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 SETDB2Q96T68 719 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 KCNF1Q9H3M0 494 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 MAGEB6P1A0A0J9YX57 407 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 OFD1O75665 1012 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 LIFRP42702 1097 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 FAM160A1Q05DH4 1040 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 VPS37DQ86XT2 251 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 LAMB1P07942 1786 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 DLEC1Q9Y238 1755 aa16.24■□□□□ 0.19
RBM39-212ENST00000429968 WDHD1O75717 1129 aaPredicted RBP16.23■□□□□ 0.19
RBM39-212ENST00000429968 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
RBM39-212ENST00000429968 FBXO33Q7Z6M2 555 aa16.23■□□□□ 0.19
RBM39-212ENST00000429968 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
RBM39-212ENST00000429968 GNAT2P19087 354 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 STK38Q15208 465 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 AXDND1Q5T1B0 1012 aaPredicted RBP16.22■□□□□ 0.19
RBM39-212ENST00000429968 ADALQ6DHV7 355 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 SASS6Q6UVJ0 657 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 CCDC82Q8N4S0 544 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 SLC26A6Q9BXS9 759 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 SPTLC2O15270 562 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 MARCKSP29966 332 aaPredicted RBP16.22■□□□□ 0.19
RBM39-212ENST00000429968 ZNF165P49910 485 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 IQCB1Q15051 598 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 ANO1Q5XXA6 986 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 CCDC73Q6ZRK6 1079 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 MRPS27Q92552 414 aaKnown RBP16.22■□□□□ 0.19
RBM39-212ENST00000429968 SHISA4Q96DD7 197 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 NACAP1Q9BZK3 213 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 KRT23Q9C075 422 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 IRS2Q9Y4H2 1338 aa16.22■□□□□ 0.19
RBM39-212ENST00000429968 MAST2Q6P0Q8 1798 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 NID2Q14112 1375 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 CCDC69A6NI79 296 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 ZPR1O75312 459 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 PRDM1O75626 825 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 PRDX5P30044 214 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 IARSP41252 1262 aaKnown RBP16.21■□□□□ 0.19
RBM39-212ENST00000429968 NBPF11Q86T75 865 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 TDRD7Q8NHU6 1098 aaKnown RBP16.21■□□□□ 0.19
RBM39-212ENST00000429968 NLRP3Q96P20 1036 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 CNNM2Q9H8M5 875 aa16.21■□□□□ 0.19
RBM39-212ENST00000429968 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
RBM39-212ENST00000429968 YEATS4O95619 227 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 SEC23AQ15436 765 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 SF3A1Q15459 793 aaKnown RBP16.21■□□□□ 0.18
RBM39-212ENST00000429968 CAVIN4Q5BKX8 364 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 FBXW7Q969H0 707 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 NSUN4Q96CB9 384 aaKnown RBP16.21■□□□□ 0.18
RBM39-212ENST00000429968 LRRC4BQ9NT99 713 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.18
RBM39-212ENST00000429968 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.18
RBM39-212ENST00000429968 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
RBM39-212ENST00000429968 MECOMQ03112 1051 aa16.2■□□□□ 0.18
RBM39-212ENST00000429968 WTAPQ15007 396 aa16.2■□□□□ 0.18
RBM39-212ENST00000429968 MAP3K14Q99558 947 aa16.2■□□□□ 0.18
RBM39-212ENST00000429968 GNL3LQ9NVN8 582 aaKnown RBP16.2■□□□□ 0.18
RBM39-212ENST00000429968 KCNJ14Q9UNX9 436 aa16.2■□□□□ 0.18
RBM39-212ENST00000429968 A0A1W2PQ27 194 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 A0A1W2PQ64 194 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 A0A1W2PQD8 194 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
RBM39-212ENST00000429968 CHAF1AQ13111 956 aaPredicted RBP16.19■□□□□ 0.18
RBM39-212ENST00000429968 PTPAQ15257 358 aa16.19■□□□□ 0.18
RBM39-212ENST00000429968 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms