RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 ME1P48163 572 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 DDR1Q08345 913 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 RPGRQ92834 1020 aaKnown RBP11.83□□□□□ -0.52
RPE-206ENST00000429921 ALG1Q9BT22 464 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 SCAND2PQ9GZW5 306 aaPredicted RBP11.83□□□□□ -0.52
RPE-206ENST00000429921 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 TAF1LQ8IZX4 1826 aa11.83□□□□□ -0.52
RPE-206ENST00000429921 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 KCNJ14Q9UNX9 436 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 C4AP0C0L4 1744 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
RPE-206ENST00000429921 EVCP57679 992 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 TICAM2Q86XR7 235 aa11.82□□□□□ -0.52
RPE-206ENST00000429921 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
RPE-206ENST00000429921 ZNF830Q96NB3 372 aaPredicted RBP11.82□□□□□ -0.52
RPE-206ENST00000429921 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 AP5Z1O43299 807 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 ATP2B1P20020 1258 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 MARCKSP29966 332 aaPredicted RBP11.81□□□□□ -0.52
RPE-206ENST00000429921 CCDC173Q0VFZ6 552 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 WTAPQ15007 396 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 ALX1Q15699 326 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 TXNRD1Q16881 649 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 CTR9Q6PD62 1173 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 TNMDQ9H2S6 317 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 ZSCAN16Q9H4T2 348 aaPredicted RBP11.81□□□□□ -0.52
RPE-206ENST00000429921 ZMYM6O95789 1325 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 A0A1B0GVL5 298 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 GRAPQ13588 217 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 ZNF827Q17R98 1081 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 FAM43AQ8N2R8 423 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 FBXO18Q8NFZ0 1043 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 GRAPLQ8TC17 118 aaPredicted RBP11.81□□□□□ -0.52
RPE-206ENST00000429921 DYNLL2Q96FJ2 89 aa11.81□□□□□ -0.52
RPE-206ENST00000429921 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
RPE-206ENST00000429921 A0A1B0GUL6 1792 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 PNPLA7Q6ZV29 1317 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 UFL1O94874 794 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
RPE-206ENST00000429921 DZIP1Q86YF9 867 aaKnown RBP11.8□□□□□ -0.52
RPE-206ENST00000429921 ANKRD2Q9GZV1 360 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
RPE-206ENST00000429921 GNL2Q13823 731 aaKnown RBP11.8□□□□□ -0.52
RPE-206ENST00000429921 NTRK3Q16288 839 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 KRT40Q6A162 431 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 STAG1Q8WVM7 1258 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 PPP1R9BQ96SB3 815 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 CFAP45Q9UL16 551 aa11.8□□□□□ -0.52
RPE-206ENST00000429921 BRWD3Q6RI45 1802 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 TNKSO95271 1327 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 CACNA1SQ13698 1873 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 ESPNB1AK53 854 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 F8W031 263 aaPredicted RBP11.79□□□□□ -0.52
RPE-206ENST00000429921 C6orf229H3BNL8 230 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 APBA3O96018 575 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 LUZP1Q86V48 1076 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 FSIP1Q8NA03 581 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 SH3RF3Q8TEJ3 882 aaPredicted RBP11.79□□□□□ -0.52
RPE-206ENST00000429921 TMEM87BQ96K49 555 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 UBAC1Q9BSL1 405 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 FUCA2Q9BTY2 467 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 MXD3Q9BW11 206 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 KRT23Q9C075 422 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.79□□□□□ -0.52
RPE-206ENST00000429921 PCDHA7Q9UN72 937 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
RPE-206ENST00000429921 KIF3AQ9Y496 699 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 LY75O60449 1722 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 UTRNP46939 3433 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 GNAT2P19087 354 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 STK38Q15208 465 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 SF3A1Q15459 793 aaKnown RBP11.79□□□□□ -0.52
RPE-206ENST00000429921 MAP3K11Q16584 847 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 SPECC1Q5M775 1068 aa11.79□□□□□ -0.52
RPE-206ENST00000429921 BAZ2BQ9UIF8 2168 aaKnown RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 ELP1O95163 1332 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 ERICH2A1L162 156 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 ANO6Q4KMQ2 910 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 ISM2Q6H9L7 571 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 SYNE3Q6ZMZ3 975 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 FBXL16Q8N461 479 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 MCM9Q9NXL9 1143 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 POLLQ9UGP5 575 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 RCOR1Q9UKL0 485 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 CHD4Q14839 1912 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 ST5P78524 1137 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 TYRO3Q06418 890 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 SSRP1Q08945 709 aaKnown RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 RTN1Q16799 776 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 ZNF654Q8IZM8 581 aa11.78□□□□□ -0.52
RPE-206ENST00000429921 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
RPE-206ENST00000429921 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms