RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 EVA1CP58658 441 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 GNL2Q13823 731 aaKnown RBP13.27□□□□□ -0.29
LINC01238-203ENST00000429456 ISM2Q6H9L7 571 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 DDX41Q9UJV9 622 aaKnown RBP13.27□□□□□ -0.29
LINC01238-203ENST00000429456 NUP98P52948 1817 aa13.27□□□□□ -0.29
LINC01238-203ENST00000429456 LRP5O75197 1615 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
LINC01238-203ENST00000429456 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
LINC01238-203ENST00000429456 ATP1A3P13637 1013 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 PNOCQ13519 176 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 TMEM67Q5HYA8 995 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 NFXL1Q6ZNB6 911 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 ZNF397Q8NF99 534 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-203ENST00000429456 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 CLIC6Q96NY7 704 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 L2HGDHQ9H9P8 463 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 EPB41L4AQ9HCS5 686 aaPredicted RBP13.26□□□□□ -0.29
LINC01238-203ENST00000429456 DOCK2Q92608 1830 aa13.26□□□□□ -0.29
LINC01238-203ENST00000429456 NRDCO43847 1150 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 TUBB4AP04350 444 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 MYL5Q02045 173 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 TRIM29Q14134 588 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 PUM3Q15397 648 aaKnown RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 METTL16Q86W50 562 aaKnown RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 IFNL3Q8IZI9 196 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 LPIN2Q92539 896 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 INCENPQ9NQS7 918 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 TRMT112Q9UI30 125 aaKnown RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 TACC3Q9Y6A5 838 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 NID2Q14112 1375 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 TIAM2Q8IVF5 1701 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 CBFA2T2O43439 604 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 MYO1BO43795 1136 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 FMNL1O95466 1100 aaPredicted RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 SSRP1Q08945 709 aaKnown RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 ELOA2Q8IYF1 753 aaPredicted RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 DPF2Q92785 391 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 MYL10Q9BUA6 226 aa13.25□□□□□ -0.29
LINC01238-203ENST00000429456 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
LINC01238-203ENST00000429456 MROH5Q6ZUA9 1318 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 UBASH3AP57075 661 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 SLC4A9Q96Q91 983 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 SLC26A6Q9BXS9 759 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 ZSWIM5Q9P217 1185 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 SLC12A7Q9Y666 1083 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 UBE2Q2LH0YL09 131 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 IFIT3O14879 490 aaKnown RBP13.24□□□□□ -0.29
LINC01238-203ENST00000429456 IFNAR1P17181 557 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 CTDSPL2Q05D32 466 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 OLFM4Q6UX06 510 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 FOXP4Q8IVH2 680 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-203ENST00000429456 SPATA5Q8NB90 893 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 WASF1Q92558 559 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 NAPBQ9H115 298 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 TMX1Q9H3N1 280 aa13.24□□□□□ -0.29
LINC01238-203ENST00000429456 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC01238-203ENST00000429456 V9GYY5 206 aaPredicted RBP13.24□□□□□ -0.29
LINC01238-203ENST00000429456 ERVV-1B6SEH8 477 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 MBD4O95243 580 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 MDM2Q00987 491 aaPredicted RBP13.23□□□□□ -0.29
LINC01238-203ENST00000429456 ELF2Q15723 593 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 AKNAD1Q5T1N1 836 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 SYT10Q6XYQ8 523 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 NOSTRINQ8IVI9 506 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 VSTM4Q8IW00 320 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 MAGEB6Q8N7X4 407 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 KRI1Q8N9T8 703 aaKnown RBP13.23□□□□□ -0.29
LINC01238-203ENST00000429456 CNNM3Q8NE01 707 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 KRT23Q9C075 422 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 ZBTB1Q9Y2K1 713 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 PCDHA5Q9Y5H7 936 aa13.23□□□□□ -0.29
LINC01238-203ENST00000429456 GSG1L2A8MUP6 293 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 CCP110O43303 1012 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 SERPINC1P01008 464 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 MAP3K12Q12852 859 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 ZNF34Q8IZ26 560 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 STK11IPQ8N1F8 1099 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 HELBQ8NG08 1087 aaPredicted RBP13.22□□□□□ -0.29
LINC01238-203ENST00000429456 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 BCL9O00512 1426 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 MMP1P03956 469 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 SLC5A1P13866 664 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 TOB1P50616 345 aaPredicted RBP13.22□□□□□ -0.29
LINC01238-203ENST00000429456 RASGRF1Q13972 1273 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 FBXO38Q6PIJ6 1188 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 DHX37Q8IY37 1157 aaKnown RBP13.22□□□□□ -0.29
LINC01238-203ENST00000429456 ARMT1Q9H993 441 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 FANCLQ9NW38 375 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 SLAIN2Q9P270 581 aa13.22□□□□□ -0.29
LINC01238-203ENST00000429456 BTBD18B2RXH4 712 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 BMP6P22004 513 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 GUCY1A2P33402 732 aa13.21□□□□□ -0.29
LINC01238-203ENST00000429456 PDE4BQ07343 736 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms