RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 ZNF446Q9NWS9 450 aa17.16■□□□□ 0.34
CACTIN-203ENST00000429344 DHX16O60231 1041 aaKnown RBP17.15■□□□□ 0.34
CACTIN-203ENST00000429344 UQCRFS1P1P0C7P4 283 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 MCAMP43121 646 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 GYS2P54840 703 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 SYCP1Q15431 976 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 CNNM3Q8NE01 707 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 ADKP55263 362 aaKnown RBP17.15■□□□□ 0.34
CACTIN-203ENST00000429344 TRIM29Q14134 588 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 BCL9O00512 1426 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 EVCP57679 992 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 LPIN2Q92539 896 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 JAG2Q9Y219 1238 aa17.15■□□□□ 0.34
CACTIN-203ENST00000429344 SCN11AQ9UI33 1791 aa17.14■□□□□ 0.34
CACTIN-203ENST00000429344 ZNF532Q9HCE3 1301 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 FGAP02671 866 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 BCAMP50895 628 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 EIF5P55010 431 aaKnown RBP17.14■□□□□ 0.33
CACTIN-203ENST00000429344 NLRP12P59046 1061 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 SETDB2Q96T68 719 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 DSCC1Q9BVC3 393 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 THRAP3Q9Y2W1 955 aaKnown RBP17.14■□□□□ 0.33
CACTIN-203ENST00000429344 ETF1P62495 437 aaKnown RBP17.14■□□□□ 0.33
CACTIN-203ENST00000429344 GNL3LQ9NVN8 582 aaKnown RBP17.14■□□□□ 0.33
CACTIN-203ENST00000429344 RTEL1Q9NZ71 1219 aa17.14■□□□□ 0.33
CACTIN-203ENST00000429344 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
CACTIN-203ENST00000429344 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
CACTIN-203ENST00000429344 FBXO18Q8NFZ0 1043 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 TIGD1Q96MW7 591 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 WDHD1O75717 1129 aaPredicted RBP17.13■□□□□ 0.33
CACTIN-203ENST00000429344 CSF1RP07333 972 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 NCOA7Q8NI08 942 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 ALDH8A1Q9H2A2 487 aaPredicted RBP17.13■□□□□ 0.33
CACTIN-203ENST00000429344 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 LZTFL1Q9NQ48 299 aa17.13■□□□□ 0.33
CACTIN-203ENST00000429344 C5P01031 1676 aa17.12■□□□□ 0.33
CACTIN-203ENST00000429344 FOXN1O15353 648 aa17.12■□□□□ 0.33
CACTIN-203ENST00000429344 MBD4O95243 580 aa17.12■□□□□ 0.33
CACTIN-203ENST00000429344 EXOSC10Q01780 885 aaKnown RBP17.12■□□□□ 0.33
CACTIN-203ENST00000429344 PNMA6AP0CW24 399 aaPredicted RBP17.12■□□□□ 0.33
CACTIN-203ENST00000429344 METAP2P50579 478 aaKnown RBP eCLIP17.12■□□□□ 0.33
CACTIN-203ENST00000429344 CMTR1Q8N1G2 835 aaKnown RBP17.12■□□□□ 0.33
CACTIN-203ENST00000429344 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
CACTIN-203ENST00000429344 MRC1P22897 1456 aa17.12■□□□□ 0.33
CACTIN-203ENST00000429344 CASQ1P31415 396 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 CAVIN4Q5BKX8 364 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 ARMT1Q9H993 441 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 COL18A1P39060 1754 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 STX17P56962 302 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
CACTIN-203ENST00000429344 GRAMD1CQ8IYS0 662 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 PIH1D3Q9NQM4 214 aaKnown RBP17.11■□□□□ 0.33
CACTIN-203ENST00000429344 PUF60Q9UHX1 559 aaKnown RBP17.11■□□□□ 0.33
CACTIN-203ENST00000429344 SPATA31A5Q5VU36 1347 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 SPATA31A7Q8IWB4 1347 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 CDHR2Q9BYE9 1310 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 RFC4P35249 363 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 MYL5Q02045 173 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 ZNF274Q96GC6 653 aaPredicted RBP17.11■□□□□ 0.33
CACTIN-203ENST00000429344 SLC26A6Q9BXS9 759 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
CACTIN-203ENST00000429344 B4E1Z4 1266 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 COBLO75128 1261 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 PDE6AP16499 860 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 CCDC12Q8WUD4 166 aaPredicted RBP17.1■□□□□ 0.33
CACTIN-203ENST00000429344 NLRP3Q96P20 1036 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 ZKSCAN3Q9BRR0 538 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
CACTIN-203ENST00000429344 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
CACTIN-203ENST00000429344 MROH7-TTC4A0A0A0MT08 1334 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 GYG1P46976 350 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 OSBPL5Q9H0X9 879 aaPredicted RBP17.1■□□□□ 0.33
CACTIN-203ENST00000429344 CYP7A1P22680 504 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 ZNF34Q8IZ26 560 aa17.1■□□□□ 0.33
CACTIN-203ENST00000429344 ERICH2A1L162 156 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
CACTIN-203ENST00000429344 CHRNDQ07001 517 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 MCM6Q14566 821 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 NUP133Q8WUM0 1156 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 AK7Q96M32 723 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
CACTIN-203ENST00000429344 IRX2Q9BZI1 471 aaPredicted RBP17.09■□□□□ 0.33
CACTIN-203ENST00000429344 KRT40Q6A162 431 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms