RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 TRIM28Q13263 835 aaKnown RBP10.15□□□□□ -0.78
CDH13-202ENST00000428848 WASHC4Q2M389 1173 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 TEX35Q5T0J7 233 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 RESP18Q5W5W9 173 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 FCHSD1Q86WN1 690 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 TMEM139Q8IV31 216 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 VSTM4Q8IW00 320 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 TXLNBQ8N3L3 684 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 PLA2G12BQ9BX93 195 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.15□□□□□ -0.78
CDH13-202ENST00000428848 FHOD1Q9Y613 1164 aa10.15□□□□□ -0.78
CDH13-202ENST00000428848 SH2B2O14492 632 aaPredicted RBP10.15□□□□□ -0.79
CDH13-202ENST00000428848 ZNF213O14771 459 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 GPAA1O43292 621 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 CBFA2T2O43439 604 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 ZRANB2O95218 330 aaKnown RBP eCLIP10.15□□□□□ -0.79
CDH13-202ENST00000428848 A1BGP04217 495 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 CSF1RP07333 972 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 MARCKSP29966 332 aaPredicted RBP10.15□□□□□ -0.79
CDH13-202ENST00000428848 UBASH3AP57075 661 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 MYL5Q02045 173 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 NTRK3Q16288 839 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 KRT40Q6A162 431 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 CTR9Q6PD62 1173 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 RALYLQ86SE5 291 aaKnown RBP10.15□□□□□ -0.79
CDH13-202ENST00000428848 VPS37DQ86XT2 251 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 RAB11FIP4Q86YS3 637 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 FOXP4Q8IVH2 680 aaPredicted RBP10.15□□□□□ -0.79
CDH13-202ENST00000428848 AIFM3Q96NN9 605 aa10.15□□□□□ -0.79
CDH13-202ENST00000428848 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.79
CDH13-202ENST00000428848 RIC1Q4ADV7 1423 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 PLCH1Q4KWH8 1693 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 CHD4Q14839 1912 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 TBX2Q13207 712 aaPredicted RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 CCDC57Q2TAC2 916 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 CYB5R4Q7L1T6 521 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 METTL16Q86W50 562 aaKnown RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 JMYQ8N9B5 988 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 ZNF622Q969S3 477 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDH13-202ENST00000428848 SYTL4Q96C24 671 aaPredicted RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 NGLY1Q96IV0 654 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 ALG1Q9BT22 464 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 SRRTQ9BXP5 876 aaKnown RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 BTG4Q9NY30 223 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 DENND2AQ9ULE3 1009 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 ANGEL1Q9UNK9 670 aaKnown RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 MAP3K15Q6ZN16 1313 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 ADD2P35612 726 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 MDM2Q00987 491 aaPredicted RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 TCIRG1Q13488 830 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 PNOCQ13519 176 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 ZNF512BQ96KM6 892 aaPredicted RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 QTRT2Q9H974 415 aaKnown RBP10.14□□□□□ -0.79
CDH13-202ENST00000428848 INTS13Q9NVM9 706 aa10.14□□□□□ -0.79
CDH13-202ENST00000428848 EXOC5O00471 708 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 CUTAO60888 179 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 TADA3O75528 432 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 CDKL5O76039 1030 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 CDC27P30260 824 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 ISM2Q6H9L7 571 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 APOA5Q6Q788 366 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 PI16Q6UXB8 463 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 KRBA2Q6ZNG9 492 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 TBC1D10CQ8IV04 446 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 RASSF4Q9H2L5 321 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 ST7Q9NRC1 585 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 FAM217BQ9NTX9 383 aaPredicted RBP10.13□□□□□ -0.79
CDH13-202ENST00000428848 GEMIN8Q9NWZ8 242 aaKnown RBP10.13□□□□□ -0.79
CDH13-202ENST00000428848 DNAI1Q9UI46 699 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 MYH3P11055 1940 aa10.13□□□□□ -0.79
CDH13-202ENST00000428848 VWA3AA6NCI4 1184 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 TMEM232C9JQI7 657 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 PCCAP05165 728 aaPredicted RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 PNMA6AP0CW24 399 aaPredicted RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 BMP6P22004 513 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 MCAMP43121 646 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 PLA2G4AP47712 749 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 METAP2P50579 478 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDH13-202ENST00000428848 ARHGAP29Q52LW3 1261 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 SGMS1Q86VZ5 419 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 IGDCC4Q8TDY8 1250 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDH13-202ENST00000428848 UBXN6Q9BZV1 441 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 RIPOR2Q9Y4F9 1068 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 PARP3Q9Y6F1 533 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 STK36Q9NRP7 1315 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 EFCAB8A8MWE9 144 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 NPHP1O15259 732 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 ARHGAP6O43182 974 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 ATP8B1O43520 1251 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 RANBP6O60518 1105 aaKnown RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 SERPINC1P01008 464 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 TNNT3P45378 269 aaPredicted RBP10.12□□□□□ -0.79
CDH13-202ENST00000428848 PDE4BQ07343 736 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 UBE3CQ15386 1083 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 LONRF3Q496Y0 759 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 GORABQ5T7V8 394 aa10.12□□□□□ -0.79
CDH13-202ENST00000428848 NT5DC1Q5TFE4 455 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms