RNA–Protein interactions for RNA: ENST00000428413.5

SCAP-206, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 3,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-206ENST00000428413 RASGRP4Q8TDF6 673 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 CPVLQ9H3G5 476 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 PEAK1Q9H792 1746 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 NEDD4P46934 1319 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 WDR17Q8IZU2 1322 aa17.25■□□□□ 0.35
SCAP-206ENST00000428413 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 USP17L12C9JPN9 530 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 USP17L21D6R901 530 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 PUM3Q15397 648 aaKnown RBP17.24■□□□□ 0.35
SCAP-206ENST00000428413 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 ERVV-2B6SEH9 535 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 NMT2O60551 498 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 CLSTN1O94985 981 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 ANKRD18AQ8IVF6 992 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 NOL10Q9BSC4 688 aaKnown RBP17.24■□□□□ 0.35
SCAP-206ENST00000428413 VPS16Q9H269 839 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 MED23Q9ULK4 1368 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 EPB41L2O43491 1005 aaKnown RBP17.24■□□□□ 0.35
SCAP-206ENST00000428413 TPM1P09493 284 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
SCAP-206ENST00000428413 GRIN1Q05586 938 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 USP49Q70CQ1 688 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
SCAP-206ENST00000428413 OXER1Q8TDS5 423 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 ITSN1Q15811 1721 aa17.24■□□□□ 0.35
SCAP-206ENST00000428413 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
SCAP-206ENST00000428413 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
SCAP-206ENST00000428413 TEX13AQ9BXU3 409 aaPredicted RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 UQCRFS1P1P0C7P4 283 aa17.23■□□□□ 0.35
SCAP-206ENST00000428413 ANTXR2P58335 489 aa17.23■□□□□ 0.35
SCAP-206ENST00000428413 NOC3LQ8WTT2 800 aaKnown RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
SCAP-206ENST00000428413 MEGF6O75095 1541 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 GOLGA8HP0CJ92 632 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 FAM193AP78312 1265 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
SCAP-206ENST00000428413 LPIN2Q92539 896 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 PCDHB6Q9Y5E3 794 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 SPATA31A3Q5VYP0 1347 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 USP42Q9H9J4 1324 aaKnown RBP17.22■□□□□ 0.35
SCAP-206ENST00000428413 ADD2P35612 726 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 TDRD7Q8NHU6 1098 aaKnown RBP17.22■□□□□ 0.35
SCAP-206ENST00000428413 NKX2-3Q8TAU0 364 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 DPF2Q92785 391 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 RRAGBQ5VZM2 374 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 KRI1Q8N9T8 703 aaKnown RBP17.22■□□□□ 0.35
SCAP-206ENST00000428413 CARD6Q9BX69 1037 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 ELP1O95163 1332 aa17.22■□□□□ 0.35
SCAP-206ENST00000428413 AKNAD1Q5T1N1 836 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
SCAP-206ENST00000428413 FUCA2Q9BTY2 467 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 ZPR1O75312 459 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 EXOSC10Q01780 885 aaKnown RBP17.21■□□□□ 0.35
SCAP-206ENST00000428413 CHRNDQ07001 517 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 IKQ13123 557 aaPredicted RBP17.21■□□□□ 0.35
SCAP-206ENST00000428413 KIF4BQ2VIQ3 1234 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 ESR2Q92731 530 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.359e-6■■□□□ 14.5
SCAP-206ENST00000428413 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 DRC1Q96MC2 740 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
SCAP-206ENST00000428413 N4BP3O15049 544 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 MYL5Q02045 173 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 PICALMQ13492 652 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
SCAP-206ENST00000428413 RGPD8O14715 1765 aaPredicted RBP17.21■□□□□ 0.34
SCAP-206ENST00000428413 TIGD1Q96MW7 591 aa17.2■□□□□ 0.34
SCAP-206ENST00000428413 AGLP35573 1532 aa17.2■□□□□ 0.34
SCAP-206ENST00000428413 PHACTR2O75167 634 aa17.2■□□□□ 0.34
SCAP-206ENST00000428413 FILIP1LQ4L180 1135 aa17.2■□□□□ 0.34
SCAP-206ENST00000428413 BRAPQ7Z569 592 aa17.2■□□□□ 0.34
SCAP-206ENST00000428413 SAMSN1Q9NSI8 373 aaKnown RBP17.2■□□□□ 0.34
SCAP-206ENST00000428413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAP-206ENST00000428413 TNKSO95271 1327 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 TRIM75PA6NK02 468 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 IDEP14735 1019 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 CRKLP46109 303 aaKnown RBP17.19■□□□□ 0.34
SCAP-206ENST00000428413 GDAP1L1Q96MZ0 367 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 CCDC196A0A1B0GTZ2 297 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 AMOTL1Q8IY63 956 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
SCAP-206ENST00000428413 RTEL1Q9NZ71 1219 aa17.19■□□□□ 0.34
SCAP-206ENST00000428413 SRP68Q9UHB9 627 aaKnown RBP17.19■□□□□ 0.34
SCAP-206ENST00000428413 PATL2C9JE40 543 aaKnown RBP17.18■□□□□ 0.34
SCAP-206ENST00000428413 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
SCAP-206ENST00000428413 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 CBFA2T2O43439 604 aa17.18■□□□□ 0.34
SCAP-206ENST00000428413 GSDMDP57764 484 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms