RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 GNGT1P63211 74 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 SKOR1P84550 965 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 WAPLQ7Z5K2 1190 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-206ENST00000428313 MYO6Q9UM54 1294 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 HPSEQ9Y251 543 aa18.26■□□□□ 0.51
C9orf3-206ENST00000428313 FAM237AA0A1B0GTK4 181 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 SARNPP82979 210 aaKnown RBP18.25■□□□□ 0.51
C9orf3-206ENST00000428313 RIN2Q8WYP3 895 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-206ENST00000428313 KLC4Q9NSK0 619 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-206ENST00000428313 MAGEC3Q8TD91 643 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 RPGRIP1Q96KN7 1286 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
C9orf3-206ENST00000428313 MROH7-TTC4A0A0A0MT08 1334 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 ZEB2O60315 1214 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 AKAP17AQ02040 695 aaKnown RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 GUCY1B3Q02153 619 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 NR1I3Q14994 352 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 ZKSCAN8Q15776 578 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 MYSM1Q5VVJ2 828 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 DHX32Q7L7V1 743 aaKnown RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 A0A1B0GUA9 196 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 GOLGA6BA6NDN3 693 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 RTN2O75298 545 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 FECHP22830 423 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 PAX7P23759 505 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 BIRC2Q13490 618 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 ELOA2Q8IYF1 753 aaPredicted RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 SEC62Q99442 399 aaKnown RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
C9orf3-206ENST00000428313 HOOK1Q9UJC3 728 aaKnown RBP18.24■□□□□ 0.51
C9orf3-206ENST00000428313 RASSF9O75901 435 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 BEND3Q5T5X7 828 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 ANO1Q5XXA6 986 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 CCDC50Q8IVM0 306 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 ENOX1Q8TC92 643 aaKnown RBP18.23■□□□□ 0.51
C9orf3-206ENST00000428313 NECTIN2Q92692 538 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 CCDC51Q96ER9 411 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 ZNF274Q96GC6 653 aaPredicted RBP18.23■□□□□ 0.51
C9orf3-206ENST00000428313 BSDC1Q9NW68 430 aaPredicted RBP18.23■□□□□ 0.51
C9orf3-206ENST00000428313 PEAK1Q9H792 1746 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 FOXO3O43524 673 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 RAPGEF3O95398 923 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 ANKRD18AQ8IVF6 992 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 GGA2Q9UJY4 613 aa18.23■□□□□ 0.51
C9orf3-206ENST00000428313 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 A0A1B0GTH6 734 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 TFRCP02786 760 aaKnown RBP18.22■□□□□ 0.51
C9orf3-206ENST00000428313 CYP21A2P08686 494 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 EPB41P11171 864 aaKnown RBP18.22■□□□□ 0.51
C9orf3-206ENST00000428313 GRIK3Q13003 919 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 DRP2Q13474 957 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 PNOCQ13519 176 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 CEP85LQ5SZL2 805 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 NAIF1Q69YI7 327 aaPredicted RBP18.22■□□□□ 0.51
C9orf3-206ENST00000428313 SYNE3Q6ZMZ3 975 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 SELENOOQ9BVL4 669 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 DACH1Q9UI36 760 aa18.22■□□□□ 0.51
C9orf3-206ENST00000428313 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
C9orf3-206ENST00000428313 COL15A1P39059 1388 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 NDUFAB1O14561 156 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 ACTN3Q08043 901 aaPredicted RBP18.21■□□□□ 0.51
C9orf3-206ENST00000428313 NBPF14Q5TI25 921 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 TRAPPC11Q7Z392 1133 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 PPFIBP1Q86W92 1011 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 NUTM2AQ8IVF1 878 aaPredicted RBP18.21■□□□□ 0.51
C9orf3-206ENST00000428313 CDC5LQ99459 802 aaKnown RBP18.21■□□□□ 0.51
C9orf3-206ENST00000428313 EHD4Q9H223 541 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 SAMM50Q9Y512 469 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 TECPR2O15040 1411 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 A0A0U1RQJ8 604 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 ANKRD33BA6NCL7 494 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 SLC39A14Q15043 492 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 CCDC40Q4G0X9 1142 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 ATRIPQ8WXE1 791 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 LRRC2Q9BYS8 371 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 NFE2L3Q9Y4A8 694 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 OVOS2A0A0G2JMS6 1433 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 OVOS2A0A0J9YW53 1432 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 OVOS2Q6IE36 1432 aa18.21■□□□□ 0.51
C9orf3-206ENST00000428313 OPA1O60313 960 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 CCT2P78371 535 aaKnown RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 EXOSC10Q01780 885 aaKnown RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 PDE4BQ07343 736 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 NCAPH2Q6IBW4 605 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 TSPOAP1O95153 1857 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 PPP6R2O75170 966 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 ICA1Q05084 483 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 CCNI2Q6ZMN8 369 aaPredicted RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 UBE3BQ7Z3V4 1068 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 METTL16Q86W50 562 aaKnown RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 PHAXQ9H814 394 aaKnown RBP18.2■□□□□ 0.5
C9orf3-206ENST00000428313 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
C9orf3-206ENST00000428313 MFAP3LO75121 409 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms