RNA–Protein interactions for RNA: ENST00000428153.6

DDR1-235, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-235ENST00000428153 MROH7-TTC4A0A0A0MT08 1334 aa21.52■■□□□ 1.03
DDR1-235ENST00000428153 HOXD10P28358 340 aa21.51■■□□□ 1.03
DDR1-235ENST00000428153 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
DDR1-235ENST00000428153 FASTKD5Q7L8L6 764 aaKnown RBP21.51■■□□□ 1.03
DDR1-235ENST00000428153 PARK7Q99497 189 aaKnown RBP21.51■■□□□ 1.03
DDR1-235ENST00000428153 GPR75-ASB3A0A0A6YYF3 556 aa21.5■■□□□ 1.03
DDR1-235ENST00000428153 EN2P19622 333 aaPredicted RBP21.5■■□□□ 1.03
DDR1-235ENST00000428153 BTDP43251 543 aa21.5■■□□□ 1.03
DDR1-235ENST00000428153 ARHGAP39Q9C0H5 1083 aa21.5■■□□□ 1.03
DDR1-235ENST00000428153 PICK1Q9NRD5 415 aa21.5■■□□□ 1.03
DDR1-235ENST00000428153 SLC45A1Q9Y2W3 748 aa21.5■■□□□ 1.03
DDR1-235ENST00000428153 A0A0G2JLL6 359 aaPredicted RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 TBC1D12O60347 775 aa21.49■■□□□ 1.03
DDR1-235ENST00000428153 CTNND1O60716 968 aaKnown RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 LDHCP07864 332 aa21.49■■□□□ 1.03
DDR1-235ENST00000428153 ARID4AP29374 1257 aaPredicted RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 GSTO1P78417 241 aa21.49■■□□□ 1.03
DDR1-235ENST00000428153 SH3BP5LQ7L8J4 393 aa21.49■■□□□ 1.03
DDR1-235ENST00000428153 PRRT2Q7Z6L0 340 aaPredicted RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 ZSCAN29Q8IWY8 852 aaPredicted RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 COL2A1P02458 1487 aaPredicted RBP21.49■■□□□ 1.03
DDR1-235ENST00000428153 IGSF3O75054 1194 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 PTPRAP18433 802 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 RHBDL3P58872 404 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 MECOMQ03112 1051 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 GPAT2Q6NUI2 795 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 NEUROD6Q96NK8 337 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 HMG20BQ9P0W2 317 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 SRRDQ9UH36 339 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 CPA4Q9UI42 421 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 ZHX2Q9Y6X8 837 aa21.48■■□□□ 1.03
DDR1-235ENST00000428153 DDTLA6NHG4 134 aaPredicted RBP21.47■■□□□ 1.03
DDR1-235ENST00000428153 BCRP11274 1271 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 PSMC4P43686 418 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 G3BP1Q13283 466 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDR1-235ENST00000428153 SLC4A8Q2Y0W8 1093 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 SPATA5Q8NB90 893 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 GPR108Q9NPR9 543 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 DDX4Q9NQI0 724 aaKnown RBP21.47■■□□□ 1.03
DDR1-235ENST00000428153 AFG3L2Q9Y4W6 797 aa21.47■■□□□ 1.03
DDR1-235ENST00000428153 UQCRFS1P1P0C7P4 283 aa21.46■■□□□ 1.03
DDR1-235ENST00000428153 GORABQ5T7V8 394 aa21.46■■□□□ 1.03
DDR1-235ENST00000428153 ZNF384Q8TF68 577 aa21.46■■□□□ 1.03
DDR1-235ENST00000428153 NSUN4Q96CB9 384 aaKnown RBP21.46■■□□□ 1.03
DDR1-235ENST00000428153 TRIM47Q96LD4 638 aa21.46■■□□□ 1.03
DDR1-235ENST00000428153 ZSWIM8A7E2V4 1837 aa21.45■■□□□ 1.03
DDR1-235ENST00000428153 DOCK1Q14185 1865 aa21.45■■□□□ 1.02
DDR1-235ENST00000428153 PNMA6EA0A0J9YXQ4 647 aa21.45■■□□□ 1.02
DDR1-235ENST00000428153 BCAR3O75815 825 aa21.45■■□□□ 1.02
DDR1-235ENST00000428153 FRAT1Q92837 279 aaPredicted RBP21.45■■□□□ 1.02
DDR1-235ENST00000428153 TBC1D2Q9BYX2 928 aa21.45■■□□□ 1.02
DDR1-235ENST00000428153 FMNL1O95466 1100 aaPredicted RBP21.44■■□□□ 1.02
DDR1-235ENST00000428153 OSBPP22059 807 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 CTGFP29279 349 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 PICALMQ13492 652 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 SH3TC2Q8TF17 1288 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 OSBPL5Q9H0X9 879 aaPredicted RBP21.44■■□□□ 1.02
DDR1-235ENST00000428153 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.44■■□□□ 1.02
DDR1-235ENST00000428153 PTPRFP10586 1907 aa21.44■■□□□ 1.02
DDR1-235ENST00000428153 FCGRTP55899 365 aa21.43■■□□□ 1.02
DDR1-235ENST00000428153 POLA2Q14181 598 aa21.43■■□□□ 1.02
DDR1-235ENST00000428153 RAET1EQ8TD07 263 aa21.43■■□□□ 1.02
DDR1-235ENST00000428153 CEP290O15078 2479 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 GRK4P32298 578 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 MCAMP43121 646 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 MYPNQ86TC9 1320 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 NKX2-3Q8TAU0 364 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 PHIPQ8WWQ0 1821 aa21.42■■□□□ 1.02
DDR1-235ENST00000428153 CYP2C8P10632 490 aa21.41■■□□□ 1.02
DDR1-235ENST00000428153 SSH3Q8TE77 659 aa21.41■■□□□ 1.02
DDR1-235ENST00000428153 CLUAP1Q96AJ1 413 aa21.41■■□□□ 1.02
DDR1-235ENST00000428153 ZNF512BQ96KM6 892 aaPredicted RBP21.41■■□□□ 1.02
DDR1-235ENST00000428153 HERC5Q9UII4 1024 aaKnown RBP21.41■■□□□ 1.02
DDR1-235ENST00000428153 PLCG2P16885 1265 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 CAPN2P17655 700 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 PI16Q6UXB8 463 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 TMEM57Q8N5G2 664 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
DDR1-235ENST00000428153 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.4■■□□□ 1.02
DDR1-235ENST00000428153 RAI14Q9P0K7 980 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 LRP2BPQ9P2M1 347 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 AGTPBP1Q9UPW5 1226 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 TNNQ9UQP3 1299 aa21.4■■□□□ 1.02
DDR1-235ENST00000428153 MGAMO43451 1857 aa21.39■■□□□ 1.02
DDR1-235ENST00000428153 CCDC158Q5M9N0 1113 aa21.39■■□□□ 1.01
DDR1-235ENST00000428153 GADL1Q6ZQY3 521 aa21.39■■□□□ 1.01
DDR1-235ENST00000428153 TBC1D9Q6ZT07 1266 aa21.39■■□□□ 1.01
DDR1-235ENST00000428153 SLAIN1Q8ND83 568 aa21.39■■□□□ 1.01
DDR1-235ENST00000428153 NOL10Q9BSC4 688 aaKnown RBP21.39■■□□□ 1.01
DDR1-235ENST00000428153 DHX36Q9H2U1 1008 aaKnown RBP21.39■■□□□ 1.01
DDR1-235ENST00000428153 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
DDR1-235ENST00000428153 BAG3O95817 575 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 GJB1P08034 283 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 UBXN2AP68543 259 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 ATP8B2P98198 1209 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 PRKCZQ05513 592 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 TNNI3KQ59H18 835 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 FPGT-TNNI3KV9GXZ4 949 aa21.38■■□□□ 1.01
DDR1-235ENST00000428153 TRIM75PA6NK02 468 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms