RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PLCG2P16885 1265 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 LEO1Q8WVC0 666 aaPredicted RBP14.8□□□□□ -0.04
SPG11-202ENST00000427534 FRMD4BQ9Y2L6 1034 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 TTC41PQ6P2S7 1318 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
SPG11-202ENST00000427534 STRN3Q13033 797 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 HS2ST1Q7LGA3 356 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 NCAPG2Q86XI2 1143 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 RABEP2Q9H5N1 569 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 TAB3Q8N5C8 712 aaPredicted RBP14.8□□□□□ -0.04
SPG11-202ENST00000427534 ARHGEF12Q9NZN5 1544 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 CCDC172P0C7W6 258 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 C4orf50Q6ZRC1 276 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 PSMB7Q99436 277 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 USP40Q9NVE5 1235 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 E7EVH7 732 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 ZNF790Q6PG37 636 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 TXNDC16Q9P2K2 825 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 KCNJ14Q9UNX9 436 aa14.8□□□□□ -0.04
SPG11-202ENST00000427534 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 CRCPO75575 148 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 UBXN2AP68543 259 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 BSPRYQ5W0U4 402 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 CAVIN2O95810 425 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 TTC6Q86TZ1 520 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 CCDC155Q8N6L0 562 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 EDC3Q96F86 508 aaKnown RBP14.79□□□□□ -0.04
SPG11-202ENST00000427534 PYM1Q9BRP8 204 aaKnown RBP14.79□□□□□ -0.04
SPG11-202ENST00000427534 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.79□□□□□ -0.042e-6■□□□□ 9.9
SPG11-202ENST00000427534 CCDC171Q6TFL3 1326 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 UBN2Q6ZU65 1347 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 DLGAP5Q15398 846 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 ADAMTS12P58397 1594 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 WDR44Q5JSH3 913 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 FAM173BQ6P4H8 233 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 TTF2Q9UNY4 1162 aaKnown RBP14.79□□□□□ -0.04
SPG11-202ENST00000427534 CCDC160A6NGH7 325 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 GTPBP4Q9BZE4 634 aaKnown RBP14.79□□□□□ -0.04
SPG11-202ENST00000427534 BLZF1Q9H2G9 400 aa14.79□□□□□ -0.04
SPG11-202ENST00000427534 GOLGA8HP0CJ92 632 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 SLC1A4P43007 532 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 PDE4DQ08499 809 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 BEND3Q5T5X7 828 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 TRIM31Q9BZY9 425 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 MAP3K19Q56UN5 1328 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 SNX16P57768 344 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 LRRC47Q8N1G4 583 aaKnown RBP14.78□□□□□ -0.04
SPG11-202ENST00000427534 SELENOOQ9BVL4 669 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 CYLC1P35663 651 aaPredicted RBP14.78□□□□□ -0.04
SPG11-202ENST00000427534 ZNF569Q5MCW4 686 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 C2CD5Q86YS7 1000 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 KCNG4Q8TDN1 519 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 FBF1Q8TES7 1133 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 IFNKQ9P0W0 207 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 BAG6P46379 1132 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 IFI16Q16666 785 aaKnown RBP14.78□□□□□ -0.04
SPG11-202ENST00000427534 MED10Q9BTT4 135 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 ZBED4O75132 1171 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 SV2BQ7L1I2 683 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 TPH2Q8IWU9 490 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 GPATCH11Q8N954 259 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
SPG11-202ENST00000427534 H7C1D1 291 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 KIF4AO95239 1232 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 F13A1P00488 732 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 SKILP12757 684 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 GYG1P46976 350 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 PUM3Q15397 648 aaKnown RBP14.78□□□□□ -0.04
SPG11-202ENST00000427534 SMC5Q8IY18 1101 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 MYCT1Q8N699 235 aa14.78□□□□□ -0.04
SPG11-202ENST00000427534 GNAT2P19087 354 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 CKAP4Q07065 602 aaKnown RBP14.77□□□□□ -0.04
SPG11-202ENST00000427534 CCDC6Q16204 474 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 KMT5BQ4FZB7 885 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 GLG1Q92896 1179 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 ZAP70P43403 619 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 AZI2Q9H6S1 392 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 QTRT2Q9H974 415 aaKnown RBP14.77□□□□□ -0.04
SPG11-202ENST00000427534 MYO1AQ9UBC5 1043 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 TRPC6Q9Y210 931 aa14.77□□□□□ -0.04
SPG11-202ENST00000427534 GNA11P29992 359 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 UBLCP1Q8WVY7 318 aaPredicted RBP14.77□□□□□ -0.05
SPG11-202ENST00000427534 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 PLEKHM2Q8IWE5 1019 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 LPXNO60711 386 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 ALAS1P13196 640 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 ZBTB16Q05516 673 aa14.77□□□□□ -0.05
SPG11-202ENST00000427534 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 GCNT3O95395 438 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 SMC1BQ8NDV3 1235 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
SPG11-202ENST00000427534 KCNQ3O43525 872 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 RRP9O43818 475 aaKnown RBP14.76□□□□□ -0.05
SPG11-202ENST00000427534 COBLO75128 1261 aa14.76□□□□□ -0.05
SPG11-202ENST00000427534 FAM102BQ5T8I3 360 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms