RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 DTHD1Q6ZMT9 781 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 ATG4DQ86TL0 474 aaPredicted RBP8.83□□□□□ -1
LINC00458-202ENST00000427299 DUSP23Q9BVJ7 150 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 MBNL3Q9NUK0 354 aaKnown RBP8.83□□□□□ -1
LINC00458-202ENST00000427299 ADAMTS6Q9UKP5 1117 aa8.83□□□□□ -1
LINC00458-202ENST00000427299 OXCT1P55809 520 aa8.82□□□□□ -1
LINC00458-202ENST00000427299 FCGRTP55899 365 aa8.82□□□□□ -1
LINC00458-202ENST00000427299 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
LINC00458-202ENST00000427299 STK35Q8TDR2 534 aa8.82□□□□□ -1
LINC00458-202ENST00000427299 GPN3Q9UHW5 284 aaPredicted RBP8.82□□□□□ -1
LINC00458-202ENST00000427299 PCOLCE2Q9UKZ9 415 aa8.82□□□□□ -1
LINC00458-202ENST00000427299 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
LINC00458-202ENST00000427299 CD96P40200 585 aa8.81□□□□□ -1
LINC00458-202ENST00000427299 IFI16Q16666 785 aaKnown RBP8.81□□□□□ -1
LINC00458-202ENST00000427299 ZC3H12AQ5D1E8 599 aaKnown RBP8.81□□□□□ -1
LINC00458-202ENST00000427299 PI16Q6UXB8 463 aa8.81□□□□□ -1
LINC00458-202ENST00000427299 KRTAP4-9Q9BYQ8 210 aa8.81□□□□□ -1
LINC00458-202ENST00000427299 RC3H2Q9HBD1 1191 aaKnown RBP8.81□□□□□ -1
LINC00458-202ENST00000427299 RNGTTO60942 597 aaKnown RBP8.8□□□□□ -1
LINC00458-202ENST00000427299 CEACAM5P06731 702 aa8.8□□□□□ -1
LINC00458-202ENST00000427299 XRCC5P13010 732 aaKnown RBP8.8□□□□□ -1
LINC00458-202ENST00000427299 SULF2Q8IWU5 870 aa8.8□□□□□ -1
LINC00458-202ENST00000427299 KCNB2Q92953 911 aa8.8□□□□□ -1
LINC00458-202ENST00000427299 ISL2Q96A47 359 aa8.8□□□□□ -1
LINC00458-202ENST00000427299 PLAGL2Q9UPG8 496 aa8.8□□□□□ -1
LINC00458-202ENST00000427299 ZNF648Q5T619 568 aaPredicted RBP8.79□□□□□ -1
LINC00458-202ENST00000427299 ARNTP27540 789 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 ERVK-24P63145 666 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 AOC3Q16853 763 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 RNF214Q8ND24 703 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 LRRN4CLQ8ND94 238 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 HRASLS5Q96KN8 279 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 BCO2Q9BYV7 579 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
LINC00458-202ENST00000427299 ZNF252P-AS1Q0IIN9 211 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 TMC7Q7Z402 723 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 TNKS2Q9H2K2 1166 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 PPP4R2Q9NY27 417 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 CACNA2D2Q9NY47 1150 aa8.77□□□□□ -1.01
LINC00458-202ENST00000427299 TMEM265A0A087WTH1 108 aa8.76□□□□□ -1.01
LINC00458-202ENST00000427299 NME2P22392 152 aa8.76□□□□□ -1.01
LINC00458-202ENST00000427299 MAP1SQ66K74 1059 aaPredicted RBP8.76□□□□□ -1.01
LINC00458-202ENST00000427299 FAM214BQ7L5A3 538 aa8.76□□□□□ -1.01
LINC00458-202ENST00000427299 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC00458-202ENST00000427299 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
LINC00458-202ENST00000427299 FAM168AQ92567 244 aa8.76□□□□□ -1.01
LINC00458-202ENST00000427299 HEXIM2Q96MH2 286 aaKnown RBP8.76□□□□□ -1.01
LINC00458-202ENST00000427299 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
LINC00458-202ENST00000427299 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
LINC00458-202ENST00000427299 SOWAHDA6NJG2 315 aa8.74□□□□□ -1.01
LINC00458-202ENST00000427299 NTF4P34130 210 aa8.74□□□□□ -1.01
LINC00458-202ENST00000427299 ANGEL2Q5VTE6 544 aaKnown RBP8.74□□□□□ -1.01
LINC00458-202ENST00000427299 NXPE4Q6UWF7 544 aa8.74□□□□□ -1.01
LINC00458-202ENST00000427299 C3orf58Q8NDZ4 430 aa8.74□□□□□ -1.01
LINC00458-202ENST00000427299 CCER1Q8TC90 406 aaPredicted RBP8.74□□□□□ -1.01
LINC00458-202ENST00000427299 SSU72Q9NP77 194 aaKnown RBP8.74□□□□□ -1.01
LINC00458-202ENST00000427299 AKAP2Q9Y2D5 859 aa8.74□□□□□ -1.01
LINC00458-202ENST00000427299 ITIH2P19823 946 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 DSC3Q14574 896 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 ZNF124Q15973 351 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.73□□□□□ -1.01
LINC00458-202ENST00000427299 SLC23A3Q6PIS1 610 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 EMILIN2Q9BXX0 1053 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 SNX11Q9Y5W9 270 aa8.73□□□□□ -1.01
LINC00458-202ENST00000427299 FARP2O94887 1054 aaPredicted RBP8.72□□□□□ -1.01
LINC00458-202ENST00000427299 MPRIPQ6WCQ1 1025 aa8.72□□□□□ -1.01
LINC00458-202ENST00000427299 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
LINC00458-202ENST00000427299 FLAD1Q8NFF5 587 aa8.72□□□□□ -1.01
LINC00458-202ENST00000427299 NECAB3Q96P71 396 aaPredicted RBP8.72□□□□□ -1.01
LINC00458-202ENST00000427299 IGF2BP3O00425 579 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC00458-202ENST00000427299 ENOX2Q16206 610 aaKnown RBP8.71□□□□□ -1.02
LINC00458-202ENST00000427299 LCE4AQ5TA78 99 aa8.71□□□□□ -1.02
LINC00458-202ENST00000427299 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
LINC00458-202ENST00000427299 DCTN4Q9UJW0 460 aa8.71□□□□□ -1.02
LINC00458-202ENST00000427299 PNMA6FA0A0J9YX94 578 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 DBX1A6NMT0 343 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 RING1Q06587 406 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 PPM1JQ5JR12 505 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 UBE3DQ7Z6J8 389 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 SPACA3Q8IXA5 215 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 ACSBG1Q96GR2 724 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 PRDM10Q9NQV6 1147 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 GTF2IRD1Q9UHL9 959 aa8.7□□□□□ -1.02
LINC00458-202ENST00000427299 ENC1O14682 589 aa8.69□□□□□ -1.02
LINC00458-202ENST00000427299 TREHO43280 583 aa8.69□□□□□ -1.02
LINC00458-202ENST00000427299 GRIN3AQ8TCU5 1115 aa8.69□□□□□ -1.02
LINC00458-202ENST00000427299 CBX8Q9HC52 389 aa8.69□□□□□ -1.02
LINC00458-202ENST00000427299 PRDM7Q9NQW5 492 aa8.69□□□□□ -1.02
LINC00458-202ENST00000427299 PAGE1O75459 146 aa8.68□□□□□ -1.02
LINC00458-202ENST00000427299 BMP6P22004 513 aa8.68□□□□□ -1.02
LINC00458-202ENST00000427299 NKPD1Q17RQ9 610 aa8.68□□□□□ -1.02
LINC00458-202ENST00000427299 ASB11Q8WXH4 323 aa8.68□□□□□ -1.02
LINC00458-202ENST00000427299 CSADQ9Y600 493 aa8.68□□□□□ -1.02
LINC00458-202ENST00000427299 TRIM37O94972 964 aa8.67□□□□□ -1.02
LINC00458-202ENST00000427299 ZBTB37Q5TC79 503 aa8.67□□□□□ -1.02
LINC00458-202ENST00000427299 TPTE2Q6XPS3 522 aa8.67□□□□□ -1.02
LINC00458-202ENST00000427299 ARID3AQ99856 593 aa8.67□□□□□ -1.02
LINC00458-202ENST00000427299 DCDC2CA8MYV0 355 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms