RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 ERICH6Q7L0X2 663 aa15.94■□□□□ 0.14
NELFE-203ENST00000426722 ZSCAN29Q8IWY8 852 aaPredicted RBP15.94■□□□□ 0.14
NELFE-203ENST00000426722 ZFPM1Q8IX07 1006 aa15.94■□□□□ 0.14
NELFE-203ENST00000426722 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
NELFE-203ENST00000426722 PICK1Q9NRD5 415 aa15.94■□□□□ 0.14
NELFE-203ENST00000426722 SLC45A1Q9Y2W3 748 aa15.94■□□□□ 0.14
NELFE-203ENST00000426722 RFX7Q2KHR2 1363 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 FMNL1O95466 1100 aaPredicted RBP15.93■□□□□ 0.14
NELFE-203ENST00000426722 LDHCP07864 332 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 NKX2-3Q8TAU0 364 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 SH3TC2Q8TF17 1288 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 DOCK1Q14185 1865 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 MROH7-TTC4A0A0A0MT08 1334 aa15.93■□□□□ 0.14
NELFE-203ENST00000426722 PTPRFP10586 1907 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 GPR75-ASB3A0A0A6YYF3 556 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 A0A0G2JLL6 359 aaPredicted RBP15.92■□□□□ 0.14
NELFE-203ENST00000426722 TBC1D12O60347 775 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 CTNND1O60716 968 aaKnown RBP15.92■□□□□ 0.14
NELFE-203ENST00000426722 BCRP11274 1271 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 PTPRAP18433 802 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 OSBPP22059 807 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 BTDP43251 543 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 GSTO1P78417 241 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 TFCP2Q12800 502 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 HABP4Q5JVS0 413 aaKnown RBP15.92■□□□□ 0.14
NELFE-203ENST00000426722 GPAT2Q6NUI2 795 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 PRRT2Q7Z6L0 340 aaPredicted RBP15.92■□□□□ 0.14
NELFE-203ENST00000426722 RAET1EQ8TD07 263 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 ZHX2Q9Y6X8 837 aa15.92■□□□□ 0.14
NELFE-203ENST00000426722 PHIPQ8WWQ0 1821 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 DDTLA6NHG4 134 aaPredicted RBP15.91■□□□□ 0.14
NELFE-203ENST00000426722 CAPN2P17655 700 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 CTGFP29279 349 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 GRK4P32298 578 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 FCGRTP55899 365 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 SH3BP5LQ7L8J4 393 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 TBC1D2Q9BYX2 928 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 MYPNQ86TC9 1320 aa15.91■□□□□ 0.14
NELFE-203ENST00000426722 GNAI2P04899 355 aa15.9■□□□□ 0.14
NELFE-203ENST00000426722 UBXN2AP68543 259 aa15.9■□□□□ 0.14
NELFE-203ENST00000426722 MECOMQ03112 1051 aa15.9■□□□□ 0.14
NELFE-203ENST00000426722 G3BP1Q13283 466 aaKnown RBP eCLIP15.9■□□□□ 0.141e-10■□□□□ 8.7
NELFE-203ENST00000426722 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
NELFE-203ENST00000426722 DDX4Q9NQI0 724 aaKnown RBP15.9■□□□□ 0.14
NELFE-203ENST00000426722 HTTP42858 3142 aa15.9■□□□□ 0.14
NELFE-203ENST00000426722 IGSF3O75054 1194 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 UQCRFS1P1P0C7P4 283 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 ARID4AP29374 1257 aaPredicted RBP15.89■□□□□ 0.13
NELFE-203ENST00000426722 RHBDL3P58872 404 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 PICALMQ13492 652 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 ATF7IPQ6VMQ6 1270 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 SPATA5Q8NB90 893 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
NELFE-203ENST00000426722 HMG20BQ9P0W2 317 aa15.89■□□□□ 0.13
NELFE-203ENST00000426722 COL2A1P02458 1487 aaPredicted RBP15.89■□□□□ 0.13
NELFE-203ENST00000426722 CYP2C8P10632 490 aa15.88■□□□□ 0.13
NELFE-203ENST00000426722 TRIM27P14373 513 aa15.88■□□□□ 0.13
NELFE-203ENST00000426722 MTFR1Q15390 333 aa15.88■□□□□ 0.13
NELFE-203ENST00000426722 GADL1Q6ZQY3 521 aa15.88■□□□□ 0.13
NELFE-203ENST00000426722 SLAIN1Q8ND83 568 aa15.88■□□□□ 0.13
NELFE-203ENST00000426722 NSUN4Q96CB9 384 aaKnown RBP15.88■□□□□ 0.13
NELFE-203ENST00000426722 MYCP01106 439 aaPredicted RBP15.87■□□□□ 0.13
NELFE-203ENST00000426722 GJB1P08034 283 aa15.87■□□□□ 0.13
NELFE-203ENST00000426722 GJA8P48165 433 aa15.87■□□□□ 0.13
NELFE-203ENST00000426722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.87■□□□□ 0.13
NELFE-203ENST00000426722 GPR108Q9NPR9 543 aa15.87■□□□□ 0.13
NELFE-203ENST00000426722 PNMA3Q9UL41 463 aa15.87■□□□□ 0.13
NELFE-203ENST00000426722 ECM2O94769 699 aaPredicted RBP15.86■□□□□ 0.13
NELFE-203ENST00000426722 PRKCZQ05513 592 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 PROCA1Q8NCQ7 364 aaPredicted RBP15.86■□□□□ 0.13
NELFE-203ENST00000426722 PXYLP1Q8TE99 480 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 SMCR8Q8TEV9 937 aaPredicted RBP15.86■□□□□ 0.13
NELFE-203ENST00000426722 ZNF384Q8TF68 577 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 NOL10Q9BSC4 688 aaKnown RBP15.86■□□□□ 0.13
NELFE-203ENST00000426722 RAI14Q9P0K7 980 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 AGTPBP1Q9UPW5 1226 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 ATAD5Q96QE3 1844 aa15.86■□□□□ 0.13
NELFE-203ENST00000426722 PNMA6EA0A0J9YXQ4 647 aa15.85■□□□□ 0.13
NELFE-203ENST00000426722 CCL5P13501 91 aa15.85■□□□□ 0.13
NELFE-203ENST00000426722 PABPC4Q13310 644 aaKnown RBP eCLIP15.85■□□□□ 0.13
NELFE-203ENST00000426722 IRF5Q13568 498 aa15.85■□□□□ 0.13
NELFE-203ENST00000426722 FRAT1Q92837 279 aaPredicted RBP15.85■□□□□ 0.13
NELFE-203ENST00000426722 RNF208Q9H0X6 261 aa15.85■□□□□ 0.13
NELFE-203ENST00000426722 LRP2BPQ9P2M1 347 aa15.85■□□□□ 0.13
NELFE-203ENST00000426722 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
NELFE-203ENST00000426722 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
NELFE-203ENST00000426722 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.85■□□□□ 0.13
NELFE-203ENST00000426722 CENPFP49454 3210 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 TRIM75PA6NK02 468 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 BCAR3O75815 825 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 BAG3O95817 575 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 PLCG2P16885 1265 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 MCAMP43121 646 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
NELFE-203ENST00000426722 ZNF280CQ8ND82 737 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms