RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 MCM10Q7L590 875 aa8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 NPM2Q86SE8 214 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 GPC2Q8N158 579 aa8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 ZNF496Q96IT1 587 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 KLF16Q9BXK1 252 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 ZNF277Q9NRM2 450 aaPredicted RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 MKI67P46013 3256 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 MYH14Q7Z406 1995 aaKnown RBP8.11□□□□□ -1.11
NIF3L1-207ENST00000426253 COL11A2P13942 1736 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 KCNQ3O43525 872 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 LGR5O75473 907 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 STAU1O95793 577 aaKnown RBP8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 ADH1AP07327 375 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 SCNN1AP37088 669 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 SMTNP53814 917 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 TAF7Q15545 349 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 Q6ZVU0 165 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 STAG2Q8N3U4 1231 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 FMNL2Q96PY5 1086 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 PLEKHF1Q96S99 279 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 GLIS2Q9BZE0 524 aaPredicted RBP8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 SERTAD1Q9UHV2 236 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 ZNF831Q5JPB2 1677 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 PAPPA2Q9BXP8 1791 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 CEMIPQ8WUJ3 1361 aa8.1□□□□□ -1.11
NIF3L1-207ENST00000426253 MYBBP1AQ9BQG0 1328 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 A6NJY4 79 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 PDE6BP35913 854 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 EPS15P42566 896 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 FOXK2Q01167 660 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 FKBP5Q13451 457 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 PRPF40BQ6NWY9 871 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 USP50Q70EL3 339 aaPredicted RBP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 SCG3Q8WXD2 468 aaKnown RBP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 ESYT1Q9BSJ8 1104 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 MIS18AQ9NYP9 233 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 NARFQ9UHQ1 456 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 ZBTB1Q9Y2K1 713 aa8.09□□□□□ -1.11
NIF3L1-207ENST00000426253 HEG1Q9ULI3 1381 aa8.09□□□□□ -1.12
NIF3L1-207ENST00000426253 SLX4Q8IY92 1834 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 MAPK8IP3Q9UPT6 1336 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 A0A087WZG4 1122 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 TTC24A2A3L6 582 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 CDK2AP1O14519 115 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 A1BGP04217 495 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 EIF6P56537 245 aaKnown RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 FKBP4Q02790 459 aaKnown RBP eCLIP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 NFE2L2Q16236 605 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 CCDC93Q567U6 631 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 RGMBQ6NW40 437 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 CYP4X1Q8N118 509 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 KDF1Q8NAX2 398 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 ZNF296Q8WUU4 475 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 CNKSR1Q969H4 720 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 TOR4AQ9NXH8 423 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 SCHIP1Q9P0W5 487 aaPredicted RBP8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 PDZRN3Q9UPQ7 1066 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 HRH3Q9Y5N1 445 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 USP16Q9Y5T5 823 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 ANKRD31Q8N7Z5 1873 aa8.08□□□□□ -1.12
NIF3L1-207ENST00000426253 SOS1Q07889 1333 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 J3QL48 77 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 FZD9O00144 591 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 NPHP1O15259 732 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 ICMTO60725 284 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 IL2RAP01589 272 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 SNRPA1P09661 255 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 EN2P19622 333 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 IL6STP40189 918 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PTGIRP43119 386 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 ZNF157P51786 506 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 EIF5P55010 431 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 RIPK4P57078 832 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRR20EP86478 221 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRR20CP86479 221 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRR20DP86480 221 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRR20BP86481 221 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRR20AP86496 221 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 INTS3Q68E01 1043 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PNISRQ8TF01 805 aaKnown RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 JDP2Q8WYK2 163 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 ITPKCQ96DU7 683 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 FAM122AQ96E09 287 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 PRKRIP1Q9H875 184 aaPredicted RBP8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 ARHGEF10LQ9HCE6 1279 aa8.07□□□□□ -1.12
NIF3L1-207ENST00000426253 MRC1P22897 1456 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 A0A1W2PRU2 124 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 PRAMEF22A3QJZ6 481 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 ZIC2O95409 532 aaPredicted RBP8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 ERCC3P19447 782 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 PLA2G5P39877 138 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 IARSP41252 1262 aaKnown RBP8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 CLN3Q13286 438 aa8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 WDR43Q15061 677 aaKnown RBP eCLIP8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.06□□□□□ -1.12
NIF3L1-207ENST00000426253 PURBQ96QR8 312 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms