RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 GPAA1O43292 621 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 MBD4O95243 580 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 LRRC8AQ8IWT6 810 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 SLC4A4Q9Y6R1 1079 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 ZNF532Q9HCE3 1301 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 ANAPC15P60006 121 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 MICALL1Q8N3F8 863 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 LIMCH1Q9UPQ0 1083 aa18.33■□□□□ 0.52
PKP4-205ENST00000426248 ARMT1Q9H993 441 aa18.32■□□□□ 0.52
PKP4-205ENST00000426248 SFPQP23246 707 aaKnown RBP eCLIP18.32■□□□□ 0.526e-7■□□□□ 10.9
PKP4-205ENST00000426248 USP5P45974 858 aa18.32■□□□□ 0.52
PKP4-205ENST00000426248 APPBP2Q92624 585 aa18.32■□□□□ 0.52
PKP4-205ENST00000426248 EPC1Q9H2F5 836 aa18.32■□□□□ 0.52
PKP4-205ENST00000426248 MCAMP43121 646 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 BRF1Q92994 677 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 NCAPGQ9BPX3 1015 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 IL25Q9H293 177 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 SLC27A2O14975 620 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 CCT2P78371 535 aaKnown RBP18.31■□□□□ 0.52
PKP4-205ENST00000426248 CARD6Q9BX69 1037 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 ARFGAP3Q9NP61 516 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 USP42Q9H9J4 1324 aaKnown RBP18.31■□□□□ 0.52
PKP4-205ENST00000426248 ADRA2BP18089 450 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 HSPA4P34932 840 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 AK2P54819 239 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
PKP4-205ENST00000426248 ANKRD1Q15327 319 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
PKP4-205ENST00000426248 C3orf67Q6ZVT6 689 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 MINPP1Q9UNW1 487 aa18.31■□□□□ 0.52
PKP4-205ENST00000426248 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
PKP4-205ENST00000426248 NEMFO60524 1076 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 FLAD1Q8NFF5 587 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 ZNF446Q9NWS9 450 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 CUL4AQ13619 759 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 TMC6Q7Z403 805 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 ZNF804AQ7Z570 1209 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 LRP6O75581 1613 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 COL16A1Q07092 1604 aaPredicted RBP18.3■□□□□ 0.52
PKP4-205ENST00000426248 A0A087WWV3 80 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
PKP4-205ENST00000426248 LSG1Q9H089 658 aaKnown RBP18.3■□□□□ 0.52
PKP4-205ENST00000426248 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 USP54Q70EL1 1684 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 VPS53Q5VIR6 699 aa18.3■□□□□ 0.52
PKP4-205ENST00000426248 EVCP57679 992 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
PKP4-205ENST00000426248 CCDC91Q7Z6B0 441 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 ZNF804BA4D1E1 1349 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 H0YIN7 160 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 NUP133Q8WUM0 1156 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 BSDC1Q9NW68 430 aaPredicted RBP18.29■□□□□ 0.52
PKP4-205ENST00000426248 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.29■□□□□ 0.522e-6■■□□□ 14.1
PKP4-205ENST00000426248 PDE6AP16499 860 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 PRR5LQ6MZQ0 368 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
PKP4-205ENST00000426248 RANBP6O60518 1105 aaKnown RBP18.28■□□□□ 0.52
PKP4-205ENST00000426248 PLA2G4AP47712 749 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 CCDC82Q8N4S0 544 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 CARMIL3Q8ND23 1372 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 H0YHG0 523 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 ADCK5Q3MIX3 580 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 FAM212AQ96EL1 285 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 UBE4AQ14139 1066 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 ISM2Q6H9L7 571 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 SDF4Q9BRK5 362 aa18.28■□□□□ 0.52
PKP4-205ENST00000426248 MAGEB6P1A0A0J9YX57 407 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 IVLP07476 585 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 SRLQ86TD4 932 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 GOLGA5Q8TBA6 731 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 OSBP2Q969R2 916 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 YY1AP1Q9H869 796 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 GYS1P13807 737 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 ATP2B1P20020 1258 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 DPP8Q6V1X1 898 aaPredicted RBP18.27■□□□□ 0.52
PKP4-205ENST00000426248 PIH1D3Q9NQM4 214 aaKnown RBP18.27■□□□□ 0.52
PKP4-205ENST00000426248 FHOD1Q9Y613 1164 aa18.27■□□□□ 0.52
PKP4-205ENST00000426248 SALL3Q9BXA9 1300 aa18.27■□□□□ 0.51
PKP4-205ENST00000426248 CCDC73Q6ZRK6 1079 aa18.27■□□□□ 0.51
PKP4-205ENST00000426248 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.51
PKP4-205ENST00000426248 ZNF526Q8TF50 670 aaPredicted RBP18.27■□□□□ 0.51
PKP4-205ENST00000426248 UBAC1Q9BSL1 405 aa18.27■□□□□ 0.51
PKP4-205ENST00000426248 SCN11AQ9UI33 1791 aa18.27■□□□□ 0.51
PKP4-205ENST00000426248 AKAP17AQ02040 695 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 Q6ZUG5 572 aa18.26■□□□□ 0.51
PKP4-205ENST00000426248 LRRN4CLQ8ND94 238 aa18.26■□□□□ 0.51
PKP4-205ENST00000426248 SRRTQ9BXP5 876 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 LDHBP07195 334 aaKnown RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 ZSCAN29Q8IWY8 852 aaPredicted RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 ZSCAN31Q96LW9 406 aaPredicted RBP18.26■□□□□ 0.51
PKP4-205ENST00000426248 KCPQ6ZWJ8 1503 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms