RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FSTL1Q12841 308 aa18.66■□□□□ 0.58
SHOX2-202ENST00000425436 TMED8Q6PL24 325 aaPredicted RBP18.66■□□□□ 0.58
SHOX2-202ENST00000425436 LCORLQ8N3X6 602 aa18.66■□□□□ 0.58
SHOX2-202ENST00000425436 OSBP2Q969R2 916 aa18.66■□□□□ 0.58
SHOX2-202ENST00000425436 TMEM39BQ9GZU3 492 aa18.66■□□□□ 0.58
SHOX2-202ENST00000425436 DDX4Q9NQI0 724 aaKnown RBP18.66■□□□□ 0.58
SHOX2-202ENST00000425436 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
SHOX2-202ENST00000425436 CNTNAP1P78357 1384 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 ST18O60284 1047 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 MBD4O95243 580 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 LRRFIP1Q32MZ4 808 aaKnown RBP18.65■□□□□ 0.58
SHOX2-202ENST00000425436 CDAN1Q8IWY9 1227 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 TGFBRAP1Q8WUH2 860 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 APPBP2Q92624 585 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 ZNF408Q9H9D4 720 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 CDK5RAP2Q96SN8 1893 aa18.65■□□□□ 0.58
SHOX2-202ENST00000425436 M0R2C6 588 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 PLCG2P16885 1265 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 TNNI2P48788 182 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 TNFAIP1Q13829 316 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 CDCA5Q96FF9 252 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 FAM227BQ96M60 508 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 IDI2Q9BXS1 227 aa18.64■□□□□ 0.58
SHOX2-202ENST00000425436 K7ELQ4 463 aaPredicted RBP18.64■□□□□ 0.57
SHOX2-202ENST00000425436 SGSM2O43147 1006 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 ZMYM1Q5SVZ6 1142 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 FKBP1CQ5VVH2 108 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 MAPKAPK5Q8IW41 473 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 AIDAQ96BJ3 306 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 ANO2Q9NQ90 1003 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
SHOX2-202ENST00000425436 PRKAB2O43741 272 aa18.63■□□□□ 0.57
SHOX2-202ENST00000425436 MCM2P49736 904 aa18.63■□□□□ 0.57
SHOX2-202ENST00000425436 NMIQ13287 307 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-202ENST00000425436 NBPF12Q5TAG4 269 aaPredicted RBP18.63■□□□□ 0.57
SHOX2-202ENST00000425436 FAM83AQ86UY5 434 aa18.63■□□□□ 0.57
SHOX2-202ENST00000425436 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
SHOX2-202ENST00000425436 PASKQ96RG2 1323 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 A0A0D9SFI3 127 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 USP5P45974 858 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 NBR1Q14596 966 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 CCDC129Q6ZRS4 1044 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 SDR42E1Q8WUS8 393 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 FAM151AQ8WW52 585 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 TEPSINQ96N21 525 aa18.62■□□□□ 0.57
SHOX2-202ENST00000425436 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
SHOX2-202ENST00000425436 ENTPD3O75355 529 aa18.61■□□□□ 0.57
SHOX2-202ENST00000425436 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
SHOX2-202ENST00000425436 CST9Q5W186 159 aa18.61■□□□□ 0.57
SHOX2-202ENST00000425436 CWC27Q6UX04 472 aaKnown RBP18.61■□□□□ 0.57
SHOX2-202ENST00000425436 ZSCAN29Q8IWY8 852 aaPredicted RBP18.61■□□□□ 0.57
SHOX2-202ENST00000425436 STRBPQ96SI9 672 aaKnown RBP18.61■□□□□ 0.57
SHOX2-202ENST00000425436 CRNKL1Q9BZJ0 848 aaKnown RBP18.61■□□□□ 0.57
SHOX2-202ENST00000425436 FZD1Q9UP38 647 aa18.61■□□□□ 0.57
SHOX2-202ENST00000425436 RFX7Q2KHR2 1363 aa18.61■□□□□ 0.57
SHOX2-202ENST00000425436 GPAA1O43292 621 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 C1QTNF8P60827 252 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 PRKG1Q13976 671 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 SLC4A8Q2Y0W8 1093 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 CERS3Q8IU89 383 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 SAP30BPQ9UHR5 308 aaKnown RBP18.6■□□□□ 0.57
SHOX2-202ENST00000425436 PPP2R3BQ9Y5P8 575 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 SLC4A4Q9Y6R1 1079 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 FLT1P17948 1338 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 RAD50Q92878 1312 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 FOCADQ5VW36 1801 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 TRPM7Q96QT4 1865 aa18.6■□□□□ 0.57
SHOX2-202ENST00000425436 DDTLA6NHG4 134 aaPredicted RBP18.59■□□□□ 0.57
SHOX2-202ENST00000425436 HSP90AA1P07900 732 aaKnown RBP18.59■□□□□ 0.57
SHOX2-202ENST00000425436 MCMDC2Q4G0Z9 681 aa18.59■□□□□ 0.57
SHOX2-202ENST00000425436 OSBPL5Q9H0X9 879 aaPredicted RBP18.59■□□□□ 0.57
SHOX2-202ENST00000425436 SLKQ9H2G2 1235 aaPredicted RBP18.59■□□□□ 0.57
SHOX2-202ENST00000425436 HELLSQ9NRZ9 838 aa18.59■□□□□ 0.57
SHOX2-202ENST00000425436 SLURP2P0DP57 97 aa18.59■□□□□ 0.57
SHOX2-202ENST00000425436 NFKBIBQ15653 356 aa18.59■□□□□ 0.57
SHOX2-202ENST00000425436 PALD1Q9ULE6 856 aa18.59■□□□□ 0.57
SHOX2-202ENST00000425436 MYH1P12882 1939 aa18.58■□□□□ 0.56
SHOX2-202ENST00000425436 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
SHOX2-202ENST00000425436 HSPA4P34932 840 aa18.58■□□□□ 0.56
SHOX2-202ENST00000425436 SUPT20HL1Q3ZLR7 823 aa18.58■□□□□ 0.56
SHOX2-202ENST00000425436 MOB2Q70IA6 237 aa18.58■□□□□ 0.56
SHOX2-202ENST00000425436 MIGA2Q7L4E1 593 aa18.58■□□□□ 0.56
SHOX2-202ENST00000425436 APPP05067 770 aa18.57■□□□□ 0.56
SHOX2-202ENST00000425436 ZNF589Q86UQ0 364 aaPredicted RBP18.57■□□□□ 0.56
SHOX2-202ENST00000425436 CSRNP1Q96S65 589 aa18.57■□□□□ 0.56
SHOX2-202ENST00000425436 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
SHOX2-202ENST00000425436 MKRN1Q9UHC7 482 aaKnown RBP18.57■□□□□ 0.56
SHOX2-202ENST00000425436 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
SHOX2-202ENST00000425436 GSG1L2A8MUP6 293 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 NF2P35240 595 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 APLP1P51693 650 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 TTLL12Q14166 644 aaPredicted RBP18.56■□□□□ 0.56
SHOX2-202ENST00000425436 VPS53Q5VIR6 699 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 IL25Q9H293 177 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 MCM9Q9NXL9 1143 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 SSC5DA1L4H1 1573 aa18.56■□□□□ 0.56
SHOX2-202ENST00000425436 PATL2C9JE40 543 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms