RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 NSUN4Q96CB9 384 aaKnown RBP19.95■□□□□ 0.78
DDR1-234ENST00000424544 EFCC1Q9HA90 598 aa19.95■□□□□ 0.78
DDR1-234ENST00000424544 NOP58Q9Y2X3 529 aaKnown RBP19.95■□□□□ 0.78
DDR1-234ENST00000424544 ERICH6Q7L0X2 663 aa19.94■□□□□ 0.78
DDR1-234ENST00000424544 DDX4Q9NQI0 724 aaKnown RBP19.94■□□□□ 0.78
DDR1-234ENST00000424544 DDTLA6NHG4 134 aaPredicted RBP19.93■□□□□ 0.78
DDR1-234ENST00000424544 MCAMP43121 646 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 PI16Q6UXB8 463 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 TBC1D9Q6ZT07 1266 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 DZIP1Q86YF9 867 aaKnown RBP19.93■□□□□ 0.78
DDR1-234ENST00000424544 ARMC5Q96C12 935 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 MROH7-TTC4A0A0A0MT08 1334 aa19.93■□□□□ 0.78
DDR1-234ENST00000424544 MAP4K4O95819 1239 aaPredicted RBP19.92■□□□□ 0.78
DDR1-234ENST00000424544 BTDP43251 543 aa19.92■□□□□ 0.78
DDR1-234ENST00000424544 C17orf99Q6UX52 265 aa19.92■□□□□ 0.78
DDR1-234ENST00000424544 ANKRD23Q86SG2 305 aa19.92■□□□□ 0.78
DDR1-234ENST00000424544 KIAA0100Q14667 2235 aaKnown RBP19.91■□□□□ 0.78
DDR1-234ENST00000424544 CXCL11O14625 94 aa19.91■□□□□ 0.78
DDR1-234ENST00000424544 TBC1D12O60347 775 aa19.91■□□□□ 0.78
DDR1-234ENST00000424544 UQCRFS1P1P0C7P4 283 aa19.91■□□□□ 0.78
DDR1-234ENST00000424544 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.91■□□□□ 0.78
DDR1-234ENST00000424544 ZNF512BQ96KM6 892 aaPredicted RBP19.91■□□□□ 0.78
DDR1-234ENST00000424544 AK9Q5TCS8 1911 aa19.91■□□□□ 0.78
DDR1-234ENST00000424544 LDHCP07864 332 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 SLURP2P0DP57 97 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 TNNI3KQ59H18 835 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 GORABQ5T7V8 394 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 FPGT-TNNI3KV9GXZ4 949 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 ADGRA2Q96PE1 1338 aa19.9■□□□□ 0.78
DDR1-234ENST00000424544 GPAT2Q6NUI2 795 aa19.89■□□□□ 0.77
DDR1-234ENST00000424544 AFG3L2Q9Y4W6 797 aa19.89■□□□□ 0.77
DDR1-234ENST00000424544 CTNND1O60716 968 aaKnown RBP19.88■□□□□ 0.77
DDR1-234ENST00000424544 SURF6O75683 361 aaKnown RBP19.88■□□□□ 0.77
DDR1-234ENST00000424544 PTPRAP18433 802 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 GSTO1P78417 241 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 LACTBP83111 547 aaPredicted RBP19.88■□□□□ 0.77
DDR1-234ENST00000424544 ARHGEF6Q15052 776 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 SCYL3Q8IZE3 742 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 DBNDD2Q9BQY9 259 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 C1orf115Q9H7X2 142 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 ZHX2Q9Y6X8 837 aa19.88■□□□□ 0.77
DDR1-234ENST00000424544 PDHXO00330 501 aa19.87■□□□□ 0.77
DDR1-234ENST00000424544 IGSF3O75054 1194 aa19.87■□□□□ 0.77
DDR1-234ENST00000424544 CTGFP29279 349 aa19.87■□□□□ 0.77
DDR1-234ENST00000424544 PPP4CP60510 307 aa19.87■□□□□ 0.77
DDR1-234ENST00000424544 ARHGAP39Q9C0H5 1083 aa19.87■□□□□ 0.77
DDR1-234ENST00000424544 A0A0G2JLL6 359 aaPredicted RBP19.86■□□□□ 0.77
DDR1-234ENST00000424544 POTEFA5A3E0 1075 aa19.86■□□□□ 0.77
DDR1-234ENST00000424544 GNRH1P01148 92 aa19.86■□□□□ 0.77
DDR1-234ENST00000424544 PRRT2Q7Z6L0 340 aaPredicted RBP19.86■□□□□ 0.77
DDR1-234ENST00000424544 ITPRIPQ8IWB1 547 aa19.86■□□□□ 0.77
DDR1-234ENST00000424544 FTSJ3Q8IY81 847 aaKnown RBP19.86■□□□□ 0.77
DDR1-234ENST00000424544 ZNF333Q96JL9 665 aa19.86■□□□□ 0.77
DDR1-234ENST00000424544 CYP2E1P05181 493 aaPredicted RBP19.85■□□□□ 0.77
DDR1-234ENST00000424544 PICALMQ13492 652 aa19.85■□□□□ 0.77
DDR1-234ENST00000424544 CCDC158Q5M9N0 1113 aa19.85■□□□□ 0.77
DDR1-234ENST00000424544 CEP85Q6P2H3 762 aa19.85■□□□□ 0.77
DDR1-234ENST00000424544 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
DDR1-234ENST00000424544 EAF2Q96CJ1 260 aaPredicted RBP19.85■□□□□ 0.77
DDR1-234ENST00000424544 RAI14Q9P0K7 980 aa19.85■□□□□ 0.77
DDR1-234ENST00000424544 DBNLQ9UJU6 430 aaKnown RBP19.85■□□□□ 0.77
DDR1-234ENST00000424544 PTCH2Q9Y6C5 1203 aa19.85■□□□□ 0.77
DDR1-234ENST00000424544 COL2A1P02458 1487 aaPredicted RBP19.85■□□□□ 0.77
DDR1-234ENST00000424544 BCRP11274 1271 aa19.84■□□□□ 0.77
DDR1-234ENST00000424544 FASTKD5Q7L8L6 764 aaKnown RBP19.84■□□□□ 0.77
DDR1-234ENST00000424544 OSBPL5Q9H0X9 879 aaPredicted RBP19.84■□□□□ 0.77
DDR1-234ENST00000424544 SNRKQ9NRH2 765 aa19.84■□□□□ 0.77
DDR1-234ENST00000424544 LRP2BPQ9P2M1 347 aa19.84■□□□□ 0.77
DDR1-234ENST00000424544 DOCK2Q92608 1830 aa19.83■□□□□ 0.77
DDR1-234ENST00000424544 RRP1BQ14684 758 aaKnown RBP19.83■□□□□ 0.77
DDR1-234ENST00000424544 PANK1Q8TE04 598 aa19.83■□□□□ 0.77
DDR1-234ENST00000424544 PICK1Q9NRD5 415 aa19.83■□□□□ 0.77
DDR1-234ENST00000424544 CPA4Q9UI42 421 aa19.83■□□□□ 0.77
DDR1-234ENST00000424544 SLC45A1Q9Y2W3 748 aa19.83■□□□□ 0.77
DDR1-234ENST00000424544 PRMT2P55345 433 aa19.82■□□□□ 0.76
DDR1-234ENST00000424544 TTC39AQ5SRH9 613 aa19.82■□□□□ 0.76
DDR1-234ENST00000424544 ADGRA1Q86SQ6 560 aa19.82■□□□□ 0.76
DDR1-234ENST00000424544 METTL16Q86W50 562 aaKnown RBP19.82■□□□□ 0.76
DDR1-234ENST00000424544 OS9Q13438 667 aaPredicted RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 KIF22Q14807 665 aa19.81■□□□□ 0.76
DDR1-234ENST00000424544 NAA16Q6N069 864 aaPredicted RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 NBPF11Q86T75 865 aa19.81■□□□□ 0.76
DDR1-234ENST00000424544 SH3RF3Q8TEJ3 882 aaPredicted RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 TRIM47Q96LD4 638 aa19.81■□□□□ 0.76
DDR1-234ENST00000424544 CCDC8Q9H0W5 538 aaPredicted RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 TLR7Q9NYK1 1049 aaKnown RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 SUPT16HQ9Y5B9 1047 aaKnown RBP19.81■□□□□ 0.76
DDR1-234ENST00000424544 PHIPQ8WWQ0 1821 aa19.81■□□□□ 0.76
DDR1-234ENST00000424544 CYP2C8P10632 490 aa19.8■□□□□ 0.76
DDR1-234ENST00000424544 ZAP70P43403 619 aa19.8■□□□□ 0.76
DDR1-234ENST00000424544 TEX11Q8IYF3 940 aa19.8■□□□□ 0.76
DDR1-234ENST00000424544 PARK7Q99497 189 aaKnown RBP19.8■□□□□ 0.76
DDR1-234ENST00000424544 PIH1D3Q9NQM4 214 aaKnown RBP19.8■□□□□ 0.76
DDR1-234ENST00000424544 AATFQ9NY61 560 aaKnown RBP eCLIP19.8■□□□□ 0.76
DDR1-234ENST00000424544 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.8■□□□□ 0.76
DDR1-234ENST00000424544 SRRDQ9UH36 339 aa19.8■□□□□ 0.76
DDR1-234ENST00000424544 RBBP6Q7Z6E9 1792 aaKnown RBP19.8■□□□□ 0.76
DDR1-234ENST00000424544 ZSWIM8A7E2V4 1837 aa19.79■□□□□ 0.76
DDR1-234ENST00000424544 BAG3O95817 575 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms