RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 ENTPD3O75355 529 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 NFIAQ12857 509 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 GPR153Q6NV75 609 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 DEFB123Q8N688 67 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 DOCK1Q14185 1865 aa19.47■□□□□ 0.71
RPUSD3-204ENST00000424438 SCYL3Q8IZE3 742 aa19.46■□□□□ 0.71
RPUSD3-204ENST00000424438 GNL3LQ9NVN8 582 aaKnown RBP19.46■□□□□ 0.71
RPUSD3-204ENST00000424438 STAP2Q9UGK3 403 aa19.46■□□□□ 0.71
RPUSD3-204ENST00000424438 GAKO14976 1311 aa19.46■□□□□ 0.71
RPUSD3-204ENST00000424438 ZNF521Q96K83 1311 aa19.46■□□□□ 0.71
RPUSD3-204ENST00000424438 ADCY3O60266 1144 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 CIAO1O76071 339 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 LDHBP07195 334 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 PRDX5P30044 214 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 ZEB1P37275 1124 aaPredicted RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 TCP10Q12799 353 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 DIXDC1Q155Q3 683 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 ZGPATQ8N5A5 531 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 MRPL50Q8N5N7 158 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 KLHDC4Q8TBB5 520 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 PAK6Q9NQU5 681 aaPredicted RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 STXBP5LQ9Y2K9 1186 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 AFG3L2Q9Y4W6 797 aa19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 PDS5AQ29RF7 1337 aaKnown RBP19.45■□□□□ 0.7
RPUSD3-204ENST00000424438 CYP2C8P10632 490 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 PTPRAP18433 802 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 ATG9AQ7Z3C6 839 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 FAM163AQ96GL9 167 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 CRISPLD2Q9H0B8 497 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 UNC93B1Q9H1C4 597 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 PICK1Q9NRD5 415 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 USP40Q9NVE5 1235 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 DENND2AQ9ULE3 1009 aa19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
RPUSD3-204ENST00000424438 CTNND1O60716 968 aaKnown RBP19.43■□□□□ 0.7
RPUSD3-204ENST00000424438 FLT3LGP49771 235 aa19.43■□□□□ 0.7
RPUSD3-204ENST00000424438 GABRQQ9UN88 632 aa19.43■□□□□ 0.7
RPUSD3-204ENST00000424438 ZHX2Q9Y6X8 837 aa19.43■□□□□ 0.7
RPUSD3-204ENST00000424438 ALPK3Q96L96 1907 aa19.43■□□□□ 0.7
RPUSD3-204ENST00000424438 NPM3O75607 178 aaKnown RBP19.42■□□□□ 0.7
RPUSD3-204ENST00000424438 TFRCP02786 760 aaKnown RBP19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 INHAP05111 366 aa19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 ATP2B3Q16720 1220 aa19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 FAM110CQ1W6H9 321 aa19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 SLF2Q8IX21 1173 aa19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 COL25A1Q9BXS0 654 aaPredicted RBP19.41■□□□□ 0.7
RPUSD3-204ENST00000424438 LOC285556D6RIA3 1793 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 TNPO2O14787 897 aaKnown RBP19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 TBC1D12O60347 775 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 MAP4K4O95819 1239 aaPredicted RBP19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 BMP8BP34820 402 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 RGS3P49796 1198 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 ZFPM1Q8IX07 1006 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 TBC1D2Q9BYX2 928 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 CEP126Q9P2H0 1117 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 AGTPBP1Q9UPW5 1226 aa19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 COL2A1P02458 1487 aaPredicted RBP19.4■□□□□ 0.7
RPUSD3-204ENST00000424438 PROCA1Q8NCQ7 364 aaPredicted RBP19.39■□□□□ 0.69
RPUSD3-204ENST00000424438 PNMA3Q9UL41 463 aa19.39■□□□□ 0.69
RPUSD3-204ENST00000424438 LRRFIP2Q9Y608 721 aaKnown RBP19.39■□□□□ 0.69
RPUSD3-204ENST00000424438 Q7L0L9 218 aa19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 SH3BP5LQ7L8J4 393 aa19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 SMCR8Q8TEV9 937 aaPredicted RBP19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 COA7Q96BR5 231 aa19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 DEFB118Q96PH6 123 aa19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 HDAC5Q9UQL6 1122 aa19.38■□□□□ 0.69
RPUSD3-204ENST00000424438 ANP32CO43423 234 aa19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 ELNP15502 786 aa19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 IL15P40933 162 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 GCLCP48506 637 aaPredicted RBP19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 ALDH1L2Q3SY69 923 aa19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 GADL1Q6ZQY3 521 aa19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 NECAB2Q7Z6G3 386 aa19.37■□□□□ 0.69
RPUSD3-204ENST00000424438 PHKA1P46020 1223 aa19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 LRIT3Q3SXY7 679 aa19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 SPTY2D1Q68D10 685 aaPredicted RBP19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 SSH1Q8WYL5 1049 aa19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 GDF15Q99988 308 aa19.36■□□□□ 0.69
RPUSD3-204ENST00000424438 DDTLA6NHG4 134 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 CCDC102BQ68D86 513 aa19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 OSBPL5Q9H0X9 879 aaPredicted RBP19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 MTMR10Q9NXD2 777 aa19.35■□□□□ 0.69
RPUSD3-204ENST00000424438 E9PSI1 815 aa19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 HMGCRP04035 888 aa19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 PABPC4Q13310 644 aaKnown RBP eCLIP19.34■□□□□ 0.695e-8■■□□□ 11.8
RPUSD3-204ENST00000424438 DZIP1Q86YF9 867 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 PAWRQ96IZ0 340 aaKnown RBP19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 ATAD5Q96QE3 1844 aa19.34■□□□□ 0.69
RPUSD3-204ENST00000424438 MROH7-TTC4A0A0A0MT08 1334 aa19.33■□□□□ 0.69
RPUSD3-204ENST00000424438 GPR75-ASB3A0A0A6YYF3 556 aa19.33■□□□□ 0.68
RPUSD3-204ENST00000424438 UBTFL1P0CB47 393 aaPredicted RBP19.33■□□□□ 0.68
RPUSD3-204ENST00000424438 C7orf61Q8IZ16 206 aa19.33■□□□□ 0.68
RPUSD3-204ENST00000424438 DDX4Q9NQI0 724 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms