RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 GRIN3BO60391 1043 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 PDE8BO95263 885 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 ATP2B4P23634 1241 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
EPHA4-206ENST00000424339 CHRNDQ07001 517 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 UBE4AQ14139 1066 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 PUM3Q15397 648 aaKnown RBP8.64□□□□□ -1.03
EPHA4-206ENST00000424339 METTL24Q5JXM2 366 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 C6orf118Q5T5N4 469 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 PSMD1Q99460 953 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 EYA3Q99504 573 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 EVA1BQ9NVM1 165 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 PPP4R2Q9NY27 417 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 ANKIB1Q9P2G1 1089 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 BCS1LQ9Y276 419 aa8.64□□□□□ -1.03
EPHA4-206ENST00000424339 LTBP1Q14766 1721 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 IFIT1P09914 478 aaKnown RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 KCNJ4P48050 445 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 DPP8Q6V1X1 898 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 C15orf52Q6ZUT6 534 aaKnown RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 CENPQQ7L2Z9 268 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 ATG9AQ7Z3C6 839 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 SMC5Q8IY18 1101 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 CLASRPQ8N2M8 674 aaKnown RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 ZNF594Q96JF6 807 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 CCDC136Q96JN2 1154 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 RTFDC1Q9BY42 306 aaPredicted RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 LRRCC1Q9C099 1032 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 SIL1Q9H173 461 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 NSFL1CQ9UNZ2 370 aaKnown RBP8.63□□□□□ -1.03
EPHA4-206ENST00000424339 FER1L6Q2WGJ9 1857 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 A0A1B0GUL6 1792 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 SNED1Q8TER0 1413 aa8.63□□□□□ -1.03
EPHA4-206ENST00000424339 MED23Q9ULK4 1368 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 C21orf2O43822 256 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 UPP2O95045 317 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 SLC5A1P13866 664 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 FKBP4Q02790 459 aaKnown RBP eCLIP8.62□□□□□ -1.03
EPHA4-206ENST00000424339 LRRC24Q50LG9 513 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 VGLL2Q8N8G2 317 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 KLHDC4Q8TBB5 520 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 RHPN1Q8TCX5 695 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 LPIN2Q92539 896 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 TAOK3Q9H2K8 898 aa8.62□□□□□ -1.03
EPHA4-206ENST00000424339 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
EPHA4-206ENST00000424339 ZNF804BA4D1E1 1349 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 UFL1O94874 794 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 KCNH2Q12809 1159 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 GPR162Q16538 588 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 ATP2B3Q16720 1220 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 CAVIN4Q5BKX8 364 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 ZNF511Q8NB15 262 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 PUS3Q9BZE2 481 aaKnown RBP8.61□□□□□ -1.03
EPHA4-206ENST00000424339 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 ZNF609O15014 1411 aa8.61□□□□□ -1.03
EPHA4-206ENST00000424339 ARAP2Q8WZ64 1704 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 ZC3H4Q9UPT8 1303 aaKnown RBP8.6□□□□□ -1.03
EPHA4-206ENST00000424339 COL4A1P02462 1669 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 SASH1O94885 1247 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 BMP2P12643 396 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 FGFR2P21802 821 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 GPSM2P81274 684 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 KIAA2012Q0VF49 1180 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 TFCP2Q12800 502 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 ARID5BQ14865 1188 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 PTPRNQ16849 979 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 TBC1D16Q8TBP0 767 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 FAM174AQ8TBP5 190 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 GPATCH3Q96I76 525 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 KLF16Q9BXK1 252 aaPredicted RBP8.6□□□□□ -1.03
EPHA4-206ENST00000424339 ZC3H12CQ9C0D7 883 aaKnown RBP8.6□□□□□ -1.03
EPHA4-206ENST00000424339 RBM19Q9Y4C8 960 aaKnown RBP8.6□□□□□ -1.03
EPHA4-206ENST00000424339 DUOX1Q9NRD9 1551 aa8.6□□□□□ -1.03
EPHA4-206ENST00000424339 A0A1B0GUL7 405 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 IGSF3O75054 1194 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 ZIC2O95409 532 aaPredicted RBP8.59□□□□□ -1.03
EPHA4-206ENST00000424339 IGHA1P01876 353 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 IGHDP01880 384 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
EPHA4-206ENST00000424339 FDX1P10109 184 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 LMNB1P20700 586 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 NUCB1Q02818 461 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 TNNI3KQ59H18 835 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 ZNF804AQ7Z570 1209 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 HOMEZQ8IX15 550 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 COA1Q9GZY4 146 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 GNL3LQ9NVN8 582 aaKnown RBP8.59□□□□□ -1.03
EPHA4-206ENST00000424339 POLLQ9UGP5 575 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 FPGT-TNNI3KV9GXZ4 949 aa8.59□□□□□ -1.03
EPHA4-206ENST00000424339 DICER1Q9UPY3 1922 aaKnown RBP8.58□□□□□ -1.04
EPHA4-206ENST00000424339 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
EPHA4-206ENST00000424339 NFKBIEO00221 500 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms