RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PTPREP23469 700 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 ADORA1P30542 326 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 SPECC1LQ69YQ0 1117 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 SPATA20Q8TB22 786 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 BAG1Q99933 345 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 NAA15Q9BXJ9 866 aaKnown RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 FOXP1Q9H334 677 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 RIPOR2Q9Y4F9 1068 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 PCDHA5Q9Y5H7 936 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 RIC1Q4ADV7 1423 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 CASQ1P31415 396 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 PNOCQ13519 176 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 MORC3Q14149 939 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 LONRF3Q496Y0 759 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 RILPL1Q5EBL4 403 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-204ENST00000424143 FOXP4Q8IVH2 680 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-204ENST00000424143 PANX2Q96RD6 677 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 UTP14AQ9BVJ6 771 aaKnown RBP17.46■□□□□ 0.39
C9orf3-204ENST00000424143 INTS13Q9NVM9 706 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 FANCLQ9NW38 375 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 MRFAP1Q9Y605 127 aa17.46■□□□□ 0.39
C9orf3-204ENST00000424143 SEMA3EO15041 775 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 IGSF3O75054 1194 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 URI1O94763 535 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-204ENST00000424143 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 CYB5R4Q7L1T6 521 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 PROSER2Q86WR7 435 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-204ENST00000424143 ZBTB38Q8NAP3 1195 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-204ENST00000424143 FBXW7Q969H0 707 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
C9orf3-204ENST00000424143 FAM217BQ9NTX9 383 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-204ENST00000424143 POTEB2H3BUK9 544 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 SSRP1Q08945 709 aaKnown RBP17.44■□□□□ 0.38
C9orf3-204ENST00000424143 IFIT5Q13325 482 aaKnown RBP17.44■□□□□ 0.38
C9orf3-204ENST00000424143 GNL2Q13823 731 aaKnown RBP17.44■□□□□ 0.38
C9orf3-204ENST00000424143 SCARF1Q14162 830 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 BRD3Q15059 726 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 PPP2R5BQ15173 497 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 SAFBQ15424 915 aaKnown RBP eCLIP17.44■□□□□ 0.38
C9orf3-204ENST00000424143 NOSTRINQ8IVI9 506 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 TC2NQ8N9U0 490 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 LRRN4CLQ8ND94 238 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 LY9Q9HBG7 655 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 PSD3Q9NYI0 1048 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 MAN1B1Q9UKM7 699 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
C9orf3-204ENST00000424143 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
C9orf3-204ENST00000424143 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 CDC27P30260 824 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 NR1I3Q14994 352 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 POSTNQ15063 836 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TMTC2Q8N394 836 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TXLNBQ8N3L3 684 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 HNRNPLLQ8WVV9 542 aaKnown RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 CARD6Q9BX69 1037 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TSPYL1Q9H0U9 437 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 ARAP2Q8WZ64 1704 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 A0A1B0GTH6 734 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 FANCGO15287 622 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 MMP1P03956 469 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 A1BGP04217 495 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TUBBP07437 444 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 BMP6P22004 513 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 FECHP22830 423 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 SLC20A2Q08357 652 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 MUM1L1Q5H9M0 696 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 CC2D1AQ6P1N0 951 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 KIFC2Q96AC6 838 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 CCDC51Q96ER9 411 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 GJB4Q9NTQ9 266 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 SRPRBQ9Y5M8 271 aaKnown RBP17.43■□□□□ 0.38
C9orf3-204ENST00000424143 UBN2Q6ZU65 1347 aa17.43■□□□□ 0.38
C9orf3-204ENST00000424143 TCRBV5S4A2TA0A5A2 114 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 TULP2O00295 520 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 MCAMP43121 646 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 STK11IPQ8N1F8 1099 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 KRT23Q9C075 422 aa17.42■□□□□ 0.38
C9orf3-204ENST00000424143 IQSEC3Q9UPP2 1182 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-204ENST00000424143 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 CCDC151A5D8V7 595 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 PATL2C9JE40 543 aaKnown RBP17.41■□□□□ 0.38
C9orf3-204ENST00000424143 TMEM232C9JQI7 657 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 PPFIA3O75145 1194 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 TBC1D8O95759 1140 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 PLCD1P51178 756 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 PPP2R3AQ06190 1150 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 PDE4BQ07343 736 aa17.41■□□□□ 0.38
C9orf3-204ENST00000424143 GPS2Q13227 327 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms