RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 ZBTB8OSQ8IWT0 167 aa12.39□□□□□ -0.43
SCN5A-205ENST00000423572 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCN5A-205ENST00000423572 BICDL2A1A5D9 508 aa12.39□□□□□ -0.43
SCN5A-205ENST00000423572 STMN4Q9H169 189 aaPredicted RBP12.39□□□□□ -0.43
SCN5A-205ENST00000423572 NUB1Q9Y5A7 615 aa12.39□□□□□ -0.43
SCN5A-205ENST00000423572 KLF18A0A0U1RQI7 1052 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 PPFIA3O75145 1194 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 YWHAEP62258 255 aaKnown RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 TUBB4BP68371 445 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 ALG1Q9BT22 464 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 IDI1Q13907 227 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 ERCC6LQ2NKX8 1250 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 METTL23Q86XA0 190 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 RAB3IPQ96QF0 476 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 KCNH4Q9UQ05 1017 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 DHX29Q7Z478 1369 aaKnown RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 ADRA2BP18089 450 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 IGBP1P78318 339 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 HEXIM1O94992 359 aaKnown RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 DCAF5Q96JK2 942 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 TCP10L2B9ZVM9 353 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 UAP1Q16222 522 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 NAP1L3Q99457 506 aaPredicted RBP12.38□□□□□ -0.43
SCN5A-205ENST00000423572 CFBP00751 764 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 PTPREP23469 700 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 TMEM57Q8N5G2 664 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 MMS19Q96T76 1030 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 FAM8A1Q9UBU6 413 aa12.38□□□□□ -0.43
SCN5A-205ENST00000423572 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 GRM8O00222 908 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 ALDH1L2Q3SY69 923 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 BIN1O00499 593 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 CCNT1O60563 726 aaKnown RBP12.37□□□□□ -0.43
SCN5A-205ENST00000423572 PALM2Q8IXS6 379 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 RARSP54136 660 aaKnown RBP12.37□□□□□ -0.43
SCN5A-205ENST00000423572 RILPL1Q5EBL4 403 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 TMTC4Q5T4D3 741 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 LMBR1LQ6UX01 489 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
SCN5A-205ENST00000423572 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 TTF2Q9UNY4 1162 aaKnown RBP12.37□□□□□ -0.43
SCN5A-205ENST00000423572 KIF28PB7ZC32 967 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 CHURC1Q8WUH1 139 aa12.37□□□□□ -0.43
SCN5A-205ENST00000423572 NFKBIAP25963 317 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 ERFEQ4G0M1 354 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 FAM114A2Q9NRY5 505 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 POLR2BP30876 1174 aaKnown RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 MAP7Q14244 749 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 RNF219Q5W0B1 726 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 RAET1EQ8TD07 263 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 NUCKS1Q9H1E3 243 aaKnown RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 TMX1Q9H3N1 280 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 CCPG1Q9ULG6 757 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 AKT3Q9Y243 479 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 LAMC3Q9Y6N6 1575 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 FLOT1O75955 427 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 TTC22Q5TAA0 569 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 ARHGEF37A1IGU5 675 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 CYLC1P35663 651 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 RAPGEF1Q13905 1077 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 MOSPD1Q9UJG1 213 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 IGF1RP08069 1367 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 SORBS3O60504 671 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 KRT27Q7Z3Y8 459 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 ARHGEF10O15013 1369 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 PAG1Q9NWQ8 432 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 NSD2O96028 1365 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 CALUO43852 315 aaPredicted RBP12.36□□□□□ -0.43
SCN5A-205ENST00000423572 CD19P15391 556 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 DCUN1D2Q6PH85 259 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 NUDT18Q6ZVK8 323 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 APOL6Q9BWW8 343 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 HMGXB3Q12766 1538 aa12.36□□□□□ -0.43
SCN5A-205ENST00000423572 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 ARPP19P56211 112 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 CCDC183Q5T5S1 534 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 GPBP1L1Q9HC44 474 aaPredicted RBP12.35□□□□□ -0.43
SCN5A-205ENST00000423572 RSRC2Q7L4I2 434 aaKnown RBP12.35□□□□□ -0.43
SCN5A-205ENST00000423572 NSRP1Q9H0G5 558 aaKnown RBP12.35□□□□□ -0.43
SCN5A-205ENST00000423572 SYCE3A1L190 88 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 CLUL1Q15846 466 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 FAM160B1Q5W0V3 765 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
SCN5A-205ENST00000423572 SYKP43405 635 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 CTR9Q6PD62 1173 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 NLGN1Q8N2Q7 840 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 CCDC68Q9H2F9 335 aa12.35□□□□□ -0.43
SCN5A-205ENST00000423572 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms