RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 RABEP1Q15276 862 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 GPR162Q16538 588 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 C9orf131Q5VYM1 1079 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 STK11IPQ8N1F8 1099 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 AGBL3Q8NEM8 1001 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 ZBED3Q96IU2 234 aaPredicted RBP10.66□□□□□ -0.7
HPS4-204ENST00000422379 TTC14Q96N46 770 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 NAPBQ9H115 298 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 ZSWIM6Q9HCJ5 1215 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 USP40Q9NVE5 1235 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 SAP30BPQ9UHR5 308 aaKnown RBP10.66□□□□□ -0.7
HPS4-204ENST00000422379 NEDD4P46934 1319 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 DICER1Q9UPY3 1922 aaKnown RBP10.66□□□□□ -0.7
HPS4-204ENST00000422379 TIAM2Q8IVF5 1701 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 K7ELQ4 463 aaPredicted RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 BAG3O95817 575 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 CASTP20810 708 aaKnown RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 PLCD1P51178 756 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 ZNF280AP59817 542 aaPredicted RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 TDRD3Q9H7E2 651 aaKnown RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 GPHNQ9NQX3 736 aaPredicted RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 FAM198AQ9UFP1 575 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 ASTN2O75129 1339 aaPredicted RBP10.65□□□□□ -0.7
HPS4-204ENST00000422379 MYO3BQ8WXR4 1341 aa10.65□□□□□ -0.7
HPS4-204ENST00000422379 MINDY4BA8MYZ0 360 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 ZNF213O14771 459 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 NEK4P51957 841 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 RBM5P52756 815 aaKnown RBP eCLIP10.64□□□□□ -0.71
HPS4-204ENST00000422379 PPARAQ07869 468 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 PICALMQ13492 652 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 IMMTQ16891 758 aaKnown RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 NBPF9Q3BBW0 867 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 SH3BP5LQ7L8J4 393 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 CHST3Q7LGC8 479 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 SLF2Q8IX21 1173 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 ATP8A2Q9NTI2 1148 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 CTNNA3Q9UI47 895 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 SCAF8Q9UPN6 1271 aaKnown RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 FOCADQ5VW36 1801 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 CLRN2A0PK11 232 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 DDNO94850 711 aaPredicted RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 ZKSCAN1P17029 563 aaPredicted RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 USP5P45974 858 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 EIF6P56537 245 aaKnown RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 ANTXR2P58335 489 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 TNIP1Q15025 636 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 SAMD7Q7Z3H4 446 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 CDAN1Q8IWY9 1227 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 MB21D2Q8IYB1 491 aaPredicted RBP10.64□□□□□ -0.71
HPS4-204ENST00000422379 SLC44A5Q8NCS7 719 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 LRRC2Q9BYS8 371 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 TM6SF1Q9BZW5 370 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 MCM9Q9NXL9 1143 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 ANAPC4Q9UJX5 808 aa10.64□□□□□ -0.71
HPS4-204ENST00000422379 NAV1Q8NEY1 1877 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 DDIT3P35638 169 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 C12orf60Q5U649 245 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 RUFY3Q7L099 469 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 CYB5R4Q7L1T6 521 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 DYNLL2Q96FJ2 89 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 NACAP1Q9BZK3 213 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 MYOZ2Q9NPC6 264 aa10.63□□□□□ -0.71
HPS4-204ENST00000422379 ECM29Q5VYK3 1845 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 WNT10BO00744 389 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 PRDM1O75626 825 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 RPS6KB1P23443 525 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 EXOSC10Q01780 885 aaKnown RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 TCP10Q12799 353 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 TBC1D10BQ4KMP7 808 aaPredicted RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 SBK1Q52WX2 424 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 MTMR14Q8NCE2 650 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 TRPM4Q8TD43 1214 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 DPF2Q92785 391 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 NEK1Q96PY6 1258 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 NOL10Q9BSC4 688 aaKnown RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 CHMP5Q9NZZ3 219 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 CNOT7Q9UIV1 285 aaKnown RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.62□□□□□ -0.71
HPS4-204ENST00000422379 LAMB1P07942 1786 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 CNTNAP1P78357 1384 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 DDTLA6NHG4 134 aaPredicted RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 B4E1Z4 1266 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 DTNBO60941 627 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 LARGE1O95461 756 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 FGRP09769 529 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 PLCG2P16885 1265 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 EPS15P42566 896 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 AK2P54819 239 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 TOB2Q14106 344 aaPredicted RBP10.62□□□□□ -0.71
HPS4-204ENST00000422379 DLGAP5Q15398 846 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 AKNAD1Q5T1N1 836 aa10.62□□□□□ -0.71
HPS4-204ENST00000422379 RBM26Q5T8P6 1007 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms