RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 DDX4Q9NQI0 724 aaKnown RBP12.14□□□□□ -0.47
NF1-203ENST00000422121 MROH7-TTC4A0A0A0MT08 1334 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 MYH2Q9UKX2 1941 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 MYO5AQ9Y4I1 1855 aaKnown RBP12.13□□□□□ -0.47
NF1-203ENST00000422121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
NF1-203ENST00000422121 NF2P35240 595 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 GJA5P36382 358 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 TCP10Q12799 353 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 TNFAIP1Q13829 316 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 TTLL12Q14166 644 aaPredicted RBP12.13□□□□□ -0.47
NF1-203ENST00000422121 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
NF1-203ENST00000422121 ARMC9Q7Z3E5 817 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 FAM151AQ8WW52 585 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 ZFP91Q96JP5 570 aaPredicted RBP12.13□□□□□ -0.47
NF1-203ENST00000422121 IDI2Q9BXS1 227 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 TSHZ2Q9NRE2 1034 aa12.13□□□□□ -0.47
NF1-203ENST00000422121 HSPA8P11142 646 aaKnown RBP12.12□□□□□ -0.47
NF1-203ENST00000422121 BTDP43251 543 aa12.12□□□□□ -0.47
NF1-203ENST00000422121 DZIP1Q86YF9 867 aaKnown RBP12.12□□□□□ -0.47
NF1-203ENST00000422121 CLASRPQ8N2M8 674 aaKnown RBP12.12□□□□□ -0.47
NF1-203ENST00000422121 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
NF1-203ENST00000422121 LRP2BPQ9P2M1 347 aa12.12□□□□□ -0.47
NF1-203ENST00000422121 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
NF1-203ENST00000422121 DDTLA6NHG4 134 aaPredicted RBP12.11□□□□□ -0.47
NF1-203ENST00000422121 PPP1R12BO60237 982 aaPredicted RBP12.11□□□□□ -0.47
NF1-203ENST00000422121 TNNI2P48788 182 aa12.11□□□□□ -0.47
NF1-203ENST00000422121 RGS3P49796 1198 aa12.11□□□□□ -0.47
NF1-203ENST00000422121 SPRYD7Q5W111 196 aa12.11□□□□□ -0.47
NF1-203ENST00000422121 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
NF1-203ENST00000422121 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.11□□□□□ -0.47
NF1-203ENST00000422121 EDC3Q96F86 508 aaKnown RBP12.11□□□□□ -0.47
NF1-203ENST00000422121 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
NF1-203ENST00000422121 UNCXA6NJT0 531 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 TM4SF4P48230 202 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 LBX1P52954 281 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 PPP4CP60510 307 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 MAP3K9P80192 1104 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 MAP3K10Q02779 954 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 MKRN3Q13064 507 aaKnown RBP12.1□□□□□ -0.47
NF1-203ENST00000422121 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
NF1-203ENST00000422121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.1□□□□□ -0.47
NF1-203ENST00000422121 SLC10A4Q96EP9 437 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 LRRCC1Q9C099 1032 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 RNF186Q9NXI6 227 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 ZNF112Q9UJU3 913 aa12.1□□□□□ -0.47
NF1-203ENST00000422121 RPAP1Q9BWH6 1393 aaPredicted RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 ENTPD3O75355 529 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 CHGBP05060 677 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 LDHCP07864 332 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 IFIT2P09913 472 aaKnown RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 VGLL4Q14135 290 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 NAA16Q6N069 864 aaPredicted RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 SLF2Q8IX21 1173 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 ANKRD13AQ8IZ07 590 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 EXOC6Q8TAG9 804 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 ZKSCAN4Q969J2 545 aaPredicted RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 WNK4Q96J92 1243 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 TMOD2Q9NZR1 351 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
NF1-203ENST00000422121 SNCAIPQ9Y6H5 919 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 OTOFQ9HC10 1997 aa12.09□□□□□ -0.47
NF1-203ENST00000422121 PHF20L1A8MW92 1017 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 ATP5JP18859 108 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 INPP5BP32019 993 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 IREB2P48200 963 aaKnown RBP12.08□□□□□ -0.48
NF1-203ENST00000422121 DYNLL1P63167 89 aaKnown RBP12.08□□□□□ -0.48
NF1-203ENST00000422121 GSTO1P78417 241 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 SLFNL1Q499Z3 407 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
NF1-203ENST00000422121 OTUD7AQ8TE49 926 aaPredicted RBP12.08□□□□□ -0.48
NF1-203ENST00000422121 PTPN18Q99952 460 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 BOLA2Q9H3K6 86 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 R3HDMLQ9H3Y0 253 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 ELP3Q9H9T3 547 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
NF1-203ENST00000422121 AATFQ9NY61 560 aaKnown RBP eCLIP12.08□□□□□ -0.48
NF1-203ENST00000422121 TCRBV5S4A2TA0A5A2 114 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 GOLIM4O00461 696 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 GTPBP6O43824 516 aaPredicted RBP12.07□□□□□ -0.48
NF1-203ENST00000422121 TRPA1O75762 1119 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 IDH1O75874 414 aaKnown RBP12.07□□□□□ -0.48
NF1-203ENST00000422121 CYP7A1P22680 504 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 PICALMQ13492 652 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 MAGEB6Q8N7X4 407 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 AIDAQ96BJ3 306 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 MS4A4AQ96JQ5 239 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 HAUS7Q99871 368 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 STK24Q9Y6E0 443 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 DOCK2Q92608 1830 aa12.07□□□□□ -0.48
NF1-203ENST00000422121 TESPA1A2RU30 521 aaPredicted RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 IGF2BP3O00425 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
NF1-203ENST00000422121 IGSF3O75054 1194 aa12.06□□□□□ -0.48
NF1-203ENST00000422121 MAP4K4O95819 1239 aaPredicted RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 ZBTB48P10074 688 aaPredicted RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 HDAC1Q13547 482 aaPredicted RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 RRP1BQ14684 758 aaKnown RBP12.06□□□□□ -0.48
NF1-203ENST00000422121 TSHZ3Q63HK5 1081 aa12.06□□□□□ -0.48
NF1-203ENST00000422121 OPTNQ96CV9 577 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms