RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 LEMD3Q9Y2U8 911 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
LINC00397-201ENST00000422074 MSMPQ1L6U9 139 aa7.42□□□□□ -1.22
LINC00397-201ENST00000422074 OGFOD3Q6PK18 319 aa7.42□□□□□ -1.22
LINC00397-201ENST00000422074 RNF214Q8ND24 703 aa7.42□□□□□ -1.22
LINC00397-201ENST00000422074 CELA3AP09093 270 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
LINC00397-201ENST00000422074 DAB2P98082 770 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 PCNX4Q63HM2 1172 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 LLGL2Q6P1M3 1020 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 MPRIPQ6WCQ1 1025 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 SMYD4Q8IYR2 804 aaPredicted RBP7.41□□□□□ -1.22
LINC00397-201ENST00000422074 CBX8Q9HC52 389 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 PARP2Q9UGN5 583 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 PCOLCE2Q9UKZ9 415 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 DAGLAQ9Y4D2 1042 aa7.41□□□□□ -1.22
LINC00397-201ENST00000422074 FAM170BA6NMN3 283 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 ADAMTS4O75173 837 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 NEFMP07197 916 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 RPS26P62854 115 aaKnown RBP7.4□□□□□ -1.22
LINC00397-201ENST00000422074 TTLL4Q14679 1199 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 GZF1Q9H116 711 aaPredicted RBP7.4□□□□□ -1.22
LINC00397-201ENST00000422074 PIDD1Q9HB75 910 aa7.4□□□□□ -1.22
LINC00397-201ENST00000422074 PRNPP04156 253 aa7.39□□□□□ -1.23
LINC00397-201ENST00000422074 NTF4P34130 210 aa7.39□□□□□ -1.23
LINC00397-201ENST00000422074 CCDC27Q2M243 656 aa7.39□□□□□ -1.23
LINC00397-201ENST00000422074 DUSP27Q5VZP5 1158 aa7.39□□□□□ -1.23
LINC00397-201ENST00000422074 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
LINC00397-201ENST00000422074 TTF2Q9UNY4 1162 aaKnown RBP7.39□□□□□ -1.23
LINC00397-201ENST00000422074 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
LINC00397-201ENST00000422074 ISL2Q96A47 359 aa7.38□□□□□ -1.23
LINC00397-201ENST00000422074 USP31Q70CQ4 1352 aa7.37□□□□□ -1.23
LINC00397-201ENST00000422074 FANCGO15287 622 aa7.37□□□□□ -1.23
LINC00397-201ENST00000422074 CYP26A1O43174 497 aa7.37□□□□□ -1.23
LINC00397-201ENST00000422074 HCLS1P14317 486 aaPredicted RBP7.37□□□□□ -1.23
LINC00397-201ENST00000422074 ST13P50502 369 aaKnown RBP7.37□□□□□ -1.23
LINC00397-201ENST00000422074 GAL3ST3Q96A11 431 aa7.37□□□□□ -1.23
LINC00397-201ENST00000422074 ACSBG1Q96GR2 724 aa7.37□□□□□ -1.23
LINC00397-201ENST00000422074 CTSHP09668 335 aa7.36□□□□□ -1.23
LINC00397-201ENST00000422074 PTPN11Q06124 597 aaPredicted RBP7.36□□□□□ -1.23
LINC00397-201ENST00000422074 PSMD2Q13200 908 aa7.36□□□□□ -1.23
LINC00397-201ENST00000422074 CYP27C1Q4G0S4 372 aa7.36□□□□□ -1.23
LINC00397-201ENST00000422074 TTBK2Q6IQ55 1244 aa7.36□□□□□ -1.23
LINC00397-201ENST00000422074 AGMOQ6ZNB7 445 aa7.36□□□□□ -1.23
LINC00397-201ENST00000422074 NOC4LQ9BVI4 516 aaKnown RBP7.36□□□□□ -1.23
LINC00397-201ENST00000422074 RNGTTO60942 597 aaKnown RBP7.35□□□□□ -1.23
LINC00397-201ENST00000422074 WNT11O96014 354 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 GP2P55259 537 aaKnown RBP7.35□□□□□ -1.23
LINC00397-201ENST00000422074 CDK5R2Q13319 367 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
LINC00397-201ENST00000422074 PPM1JQ5JR12 505 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 ZBTB37Q5TC79 503 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 CYFIP1Q7L576 1253 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 LGR6Q9HBX8 967 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 BSDC1Q9NW68 430 aaPredicted RBP7.35□□□□□ -1.23
LINC00397-201ENST00000422074 PCDHA4Q9UN74 947 aa7.35□□□□□ -1.23
LINC00397-201ENST00000422074 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
LINC00397-201ENST00000422074 TAF1CQ15572 869 aaPredicted RBP7.34□□□□□ -1.23
LINC00397-201ENST00000422074 MEI1Q5TIA1 1274 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 NFXL1Q6ZNB6 911 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 C12orf40Q86WS4 652 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.34□□□□□ -1.23
LINC00397-201ENST00000422074 DUSP23Q9BVJ7 150 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 MKNK2Q9HBH9 465 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 CCDC39Q9UFE4 941 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 ZC3H7BQ9UGR2 993 aaKnown RBP7.34□□□□□ -1.23
LINC00397-201ENST00000422074 SNCAIPQ9Y6H5 919 aa7.34□□□□□ -1.23
LINC00397-201ENST00000422074 DCDC2CA8MYV0 355 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 FAM87AP0C7U9 286 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 RLBP1P12271 317 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 CAP2P40123 477 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 LIG3P49916 1009 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 TAGLNQ01995 201 aaKnown RBP7.33□□□□□ -1.24
LINC00397-201ENST00000422074 INPP5AQ14642 412 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 LRFN4Q6PJG9 635 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 FAM214BQ7L5A3 538 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 KCT2Q8NC54 265 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 TACC3Q9Y6A5 838 aa7.33□□□□□ -1.24
LINC00397-201ENST00000422074 OAS3Q9Y6K5 1087 aaKnown RBP7.33□□□□□ -1.24
LINC00397-201ENST00000422074 HDXQ7Z353 690 aa7.32□□□□□ -1.24
LINC00397-201ENST00000422074 VSIG10LQ86VR7 867 aa7.32□□□□□ -1.24
LINC00397-201ENST00000422074 CRELD1Q96HD1 420 aa7.32□□□□□ -1.24
LINC00397-201ENST00000422074 CSADQ9Y600 493 aa7.32□□□□□ -1.24
LINC00397-201ENST00000422074 GFRA2O00451 464 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 SORBS3O60504 671 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 LEFTY1O75610 366 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 ITGAEP38570 1179 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 UBE3DQ7Z6J8 389 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 ZNF507Q8TCN5 953 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 ELMO3Q96BJ8 720 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 PLPPR2Q96GM1 343 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 FAM161BQ96MY7 647 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 SSU72Q9NP77 194 aaKnown RBP7.31□□□□□ -1.24
LINC00397-201ENST00000422074 PCDHB5Q9Y5E4 795 aa7.31□□□□□ -1.24
LINC00397-201ENST00000422074 COL17A1Q9UMD9 1497 aaPredicted RBP7.3□□□□□ -1.24
LINC00397-201ENST00000422074 TFE3P19532 575 aaPredicted RBP7.3□□□□□ -1.24
LINC00397-201ENST00000422074 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.3□□□□□ -1.24
LINC00397-201ENST00000422074 CCDC84Q86UT8 332 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms