RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 CACNB2Q08289 660 aaPredicted RBP15.31■□□□□ 0.04
UFD1-203ENST00000421968 TEKT1Q969V4 418 aa15.31■□□□□ 0.04
UFD1-203ENST00000421968 HDLBPQ00341 1268 aaKnown RBP15.3■□□□□ 0.04
UFD1-203ENST00000421968 GRIK5Q16478 980 aa15.3■□□□□ 0.04
UFD1-203ENST00000421968 TDRD7Q8NHU6 1098 aaKnown RBP15.3■□□□□ 0.04
UFD1-203ENST00000421968 PICK1Q9NRD5 415 aa15.3■□□□□ 0.04
UFD1-203ENST00000421968 PNMA3Q9UL41 463 aa15.3■□□□□ 0.04
UFD1-203ENST00000421968 GPR37L1O60883 481 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 DUSP27Q5VZP5 1158 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 PRDM12Q9H4Q4 367 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 AFG3L2Q9Y4W6 797 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
UFD1-203ENST00000421968 PTPRFP10586 1907 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.28■□□□□ 0.04
UFD1-203ENST00000421968 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.28■□□□□ 0.04
UFD1-203ENST00000421968 FAM86C2PA6NEL3 165 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 ZKSCAN1P17029 563 aaPredicted RBP15.28■□□□□ 0.04
UFD1-203ENST00000421968 PTPRAP18433 802 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 UBE3BQ7Z3V4 1068 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 ZDHHC15Q96MV8 337 aa15.28■□□□□ 0.04
UFD1-203ENST00000421968 TSPYL2Q9H2G4 693 aaPredicted RBP15.28■□□□□ 0.04
UFD1-203ENST00000421968 PLIN1O60240 522 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.04
UFD1-203ENST00000421968 IGKV5-2P06315 115 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 IGFBP4P22692 258 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 GCLCP48506 637 aaPredicted RBP15.27■□□□□ 0.04
UFD1-203ENST00000421968 TCP10Q12799 353 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.04
UFD1-203ENST00000421968 SCYL3Q8IZE3 742 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 FAM151AQ8WW52 585 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 CXXC1Q9P0U4 656 aaPredicted RBP15.27■□□□□ 0.04
UFD1-203ENST00000421968 MAP3K2Q9Y2U5 619 aa15.27■□□□□ 0.04
UFD1-203ENST00000421968 ANKRD18BA2A2Z9 1011 aa15.26■□□□□ 0.03
UFD1-203ENST00000421968 TRIM75PA6NK02 468 aa15.26■□□□□ 0.03
UFD1-203ENST00000421968 XRCC5P13010 732 aaKnown RBP15.26■□□□□ 0.03
UFD1-203ENST00000421968 HIBADHP31937 336 aaKnown RBP15.26■□□□□ 0.03
UFD1-203ENST00000421968 TREML2Q5T2D2 321 aa15.26■□□□□ 0.03
UFD1-203ENST00000421968 APOBEC3HQ6NTF7 200 aaKnown RBP15.26■□□□□ 0.03
UFD1-203ENST00000421968 C11orf16Q9NQ32 467 aa15.26■□□□□ 0.03
UFD1-203ENST00000421968 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
UFD1-203ENST00000421968 FRMPD3Q5JV73 1810 aa15.25■□□□□ 0.03
UFD1-203ENST00000421968 GYG1P46976 350 aa15.25■□□□□ 0.03
UFD1-203ENST00000421968 TFF2Q03403 129 aa15.25■□□□□ 0.03
UFD1-203ENST00000421968 ADGRE1Q14246 886 aa15.25■□□□□ 0.03
UFD1-203ENST00000421968 AAK1Q2M2I8 961 aa15.25■□□□□ 0.03
UFD1-203ENST00000421968 H7C1W4 665 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 SMIM22K7EJ46 135 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 CSF1RP07333 972 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 KCNQ1P51787 676 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 EPHB4P54760 987 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 NEXNQ0ZGT2 675 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 CHAF1AQ13111 956 aaPredicted RBP15.24■□□□□ 0.03
UFD1-203ENST00000421968 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
UFD1-203ENST00000421968 SH3RF1Q7Z6J0 888 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 SOCS4Q8WXH5 440 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 PLA2G12BQ9BX93 195 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 PDLIM7Q9NR12 457 aa15.24■□□□□ 0.03
UFD1-203ENST00000421968 TRIM43BA6NCK2 446 aa15.23■□□□□ 0.03
UFD1-203ENST00000421968 DNM1LO00429 736 aa15.23■□□□□ 0.03
UFD1-203ENST00000421968 TMPOP42166 694 aaKnown RBP15.23■□□□□ 0.03
UFD1-203ENST00000421968 CCL14Q16627 93 aa15.23■□□□□ 0.03
UFD1-203ENST00000421968 TRIM60Q495X7 471 aa15.23■□□□□ 0.03
UFD1-203ENST00000421968 SLC39A5Q6ZMH5 540 aa15.23■□□□□ 0.03
UFD1-203ENST00000421968 TRIM43Q96BQ3 446 aaPredicted RBP15.23■□□□□ 0.03
UFD1-203ENST00000421968 RLFQ13129 1914 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 PHF20L1A8MW92 1017 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 NHLH1Q02575 133 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 TBC1D22AQ8WUA7 517 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 LPAR1Q92633 364 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 FAM84BQ96KN1 310 aaPredicted RBP15.22■□□□□ 0.03
UFD1-203ENST00000421968 MRIQ9BWK5 157 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 IQSEC3Q9UPP2 1182 aaPredicted RBP15.22■□□□□ 0.03
UFD1-203ENST00000421968 ZDBF2Q9HCK1 2354 aa15.22■□□□□ 0.03
UFD1-203ENST00000421968 NEURL1BA8MQ27 555 aa15.21■□□□□ 0.03
UFD1-203ENST00000421968 CCDC129Q6ZRS4 1044 aa15.21■□□□□ 0.03
UFD1-203ENST00000421968 DDX20Q9UHI6 824 aaKnown RBP15.21■□□□□ 0.03
UFD1-203ENST00000421968 PI4KAP2A4QPH2 592 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 FRAT2O75474 233 aaPredicted RBP15.2■□□□□ 0.02
UFD1-203ENST00000421968 CNGA1P29973 690 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 RGS2P41220 211 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
UFD1-203ENST00000421968 IFIT5Q13325 482 aaKnown RBP15.2■□□□□ 0.02
UFD1-203ENST00000421968 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 CCDC84Q86UT8 332 aaPredicted RBP15.2■□□□□ 0.02
UFD1-203ENST00000421968 MICALL1Q8N3F8 863 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 PI4KAP1Q8N8J0 262 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 KHSRPQ92945 711 aaKnown RBP eCLIP15.2■□□□□ 0.022e-12■■■□□ 15.4
UFD1-203ENST00000421968 ASCC2Q9H1I8 757 aaPredicted RBP15.2■□□□□ 0.02
UFD1-203ENST00000421968 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
UFD1-203ENST00000421968 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
UFD1-203ENST00000421968 MAST3O60307 1309 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 MSCO60682 206 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 ITGB8P26012 769 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 PBX2P40425 430 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 NFIAQ12857 509 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms