RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 SYNE3Q6ZMZ3 975 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 STAG1Q8WVM7 1258 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 AIDAQ96BJ3 306 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 CNNM2Q9H8M5 875 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 IMPACTQ9P2X3 320 aa10.12□□□□□ -0.79
TRIM49D1-201ENST00000420869 UBR3Q6ZT12 1888 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 GOLGA8AA7E2F4 631 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 IKBKBO14920 756 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 MBD4O95243 580 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 NTSR2O95665 410 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 SLC3A2P08195 630 aaKnown RBP10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 IFNAR1P17181 557 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 MAP3K12Q12852 859 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 PARP10Q53GL7 1025 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 AKNAD1Q5T1N1 836 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 SUSD4Q5VX71 490 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 RESP18Q5W5W9 173 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 ELOA2Q8IYF1 753 aaPredicted RBP10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 ERCC4Q92889 916 aaPredicted RBP10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 SDF4Q9BRK5 362 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 CCDC87Q9NVE4 849 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 ZNF804BA4D1E1 1349 aa10.11□□□□□ -0.79
TRIM49D1-201ENST00000420869 CCDC69A6NI79 296 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 EXOC5O00471 708 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 CAMTA2O94983 1202 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 GNAT2P19087 354 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 IARSP41252 1262 aaKnown RBP10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 KCNJ6P48051 423 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 GSDMDP57764 484 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 SHC4Q6S5L8 630 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 MICU3Q86XE3 530 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 MAGEB6Q8N7X4 407 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 TSC1Q92574 1164 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 CDCA7Q9BWT1 371 aaPredicted RBP10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 KRT23Q9C075 422 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 NAPBQ9H115 298 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 HSD3B7Q9H2F3 369 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 MORC2Q9Y6X9 1032 aaPredicted RBP10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 LTBP4Q8N2S1 1624 aa10.1□□□□□ -0.79
TRIM49D1-201ENST00000420869 CUTAO60888 179 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 RXRAP19793 462 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 ARID5BQ14865 1188 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 TMEM67Q5HYA8 995 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 JMYQ8N9B5 988 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 HELBQ8NG08 1087 aaPredicted RBP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 PHKBQ93100 1093 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 C16orf45Q96MC5 204 aaPredicted RBP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 UTP14AQ9BVJ6 771 aaKnown RBP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 CCDC94Q9BW85 323 aaPredicted RBP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 ZSWIM5Q9P217 1185 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 THSD7AQ9UPZ6 1657 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 PAXBP1Q9Y5B6 917 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 MYH4Q9Y623 1939 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 ARFGEF1Q9Y6D6 1849 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 SPATA31A1Q5TZJ5 1347 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 APPP05067 770 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 TNNT1P13805 278 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 SYKP43405 635 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 DHX8Q14562 1220 aaKnown RBP10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 LCORLQ8N3X6 602 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 WASF1Q92558 559 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 ARMT1Q9H993 441 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 ANAPC4Q9UJX5 808 aa10.09□□□□□ -0.79
TRIM49D1-201ENST00000420869 USP27XA6NNY8 438 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 MYO1BO43795 1136 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 MMP1P03956 469 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 SKILP12757 684 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 MARCKSP29966 332 aaPredicted RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 CRKLP46109 303 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 SSRP1Q08945 709 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 CCDC152Q4G0S7 254 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 METTL16Q86W50 562 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 CCAR2Q8N163 923 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 CCDC150Q8NCX0 1101 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 XPO4Q9C0E2 1151 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 THRAP3Q9Y2W1 955 aaKnown RBP10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 SLC12A7Q9Y666 1083 aa10.08□□□□□ -0.8
TRIM49D1-201ENST00000420869 LTBP1Q14766 1721 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 KDM4FA0A1W2PPD8 638 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 IFIT3O14879 490 aaKnown RBP10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 NCBP1Q09161 790 aaKnown RBP10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 ITPK1Q13572 414 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 TRIM29Q14134 588 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 TPD52L1Q16890 204 aaPredicted RBP10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 NFXL1Q6ZNB6 911 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 MFSD6Q6ZSS7 791 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 NOSTRINQ8IVI9 506 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 MPHOSPH8Q99549 860 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 MYL10Q9BUA6 226 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 INCENPQ9NQS7 918 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 ATAD5Q96QE3 1844 aa10.07□□□□□ -0.8
TRIM49D1-201ENST00000420869 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms