RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 FCGRTP55899 365 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 UBXN2AP68543 259 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 TCP10Q12799 353 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 DIXDC1Q155Q3 683 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 WDR66Q8TBY9 1149 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 FAM198AQ9UFP1 575 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 NR2E3Q9Y5X4 410 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
TNFAIP3-202ENST00000420009 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 A0A1W2PPC1 479 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 CYP2C8P10632 490 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 UNC93B1Q9H1C4 597 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 GABRQQ9UN88 632 aa12.8□□□□□ -0.36
TNFAIP3-202ENST00000420009 DOCK2Q92608 1830 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 MGAMO43451 1857 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 PHF20L1A8MW92 1017 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 SGPL1O95470 568 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 SLC5A1P13866 664 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 PRDX5P30044 214 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 RFX5P48382 616 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 LPIN2Q92539 896 aa12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 BIN2Q9UBW5 565 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-202ENST00000420009 EYA2O00167 538 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 ADCY3O60266 1144 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 FLT3LGP49771 235 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 IRF5Q13568 498 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 ZFPM1Q8IX07 1006 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 SCYL3Q8IZE3 742 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 PXYLP1Q8TE99 480 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 SLC45A1Q9Y2W3 748 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 SALL1Q9NSC2 1324 aa12.78□□□□□ -0.36
TNFAIP3-202ENST00000420009 SOX1O00570 391 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 INHAP05111 366 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 ELNP15502 786 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 CAPN2P17655 700 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 PTPRAP18433 802 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 FASTKD5Q7L8L6 764 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 MRPL50Q8N5N7 158 aaKnown RBP12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 IDI2Q9BXS1 227 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 USP44Q9H0E7 712 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 PAK6Q9NQU5 681 aaPredicted RBP12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 AFG3L2Q9Y4W6 797 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 PTPRFP10586 1907 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 PTPRCP08575 1304 aa12.77□□□□□ -0.37
TNFAIP3-202ENST00000420009 ENTPD3O75355 529 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 LDHBP07195 334 aaKnown RBP12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 MAP3K10Q02779 954 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 SH3BP5LQ7L8J4 393 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 CRISPLD2Q9H0B8 497 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 PICK1Q9NRD5 415 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 GAKO14976 1311 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 DOCK1Q14185 1865 aa12.76□□□□□ -0.37
TNFAIP3-202ENST00000420009 A0A0C4DFX4 3053 aa12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 TNPO2O14787 897 aaKnown RBP12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 EVI5O60447 810 aa12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 RGS3P49796 1198 aa12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 PHIPQ8WWQ0 1821 aa12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 DEFB118Q96PH6 123 aa12.75□□□□□ -0.37
TNFAIP3-202ENST00000420009 POTEB2H3BUK9 544 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 SEMA3EO15041 775 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 CIAO1O76071 339 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 ATP2B3Q16720 1220 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 SMCR8Q8TEV9 937 aaPredicted RBP12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 LRCH3Q96II8 777 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 AGTPBP1Q9UPW5 1226 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 AK9Q5TCS8 1911 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 ALPK3Q96L96 1907 aa12.74□□□□□ -0.37
TNFAIP3-202ENST00000420009 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 DLL1O00548 723 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 CTNND1O60716 968 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 TFRCP02786 760 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 SLURP2P0DP57 97 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 PHKA1P46020 1223 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 PLSCR2Q9NRY7 297 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 STAP2Q9UGK3 403 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 DENND2AQ9ULE3 1009 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 LOC285556D6RIA3 1793 aa12.73□□□□□ -0.37
TNFAIP3-202ENST00000420009 PDS5AQ29RF7 1337 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 TRIM75PA6NK02 468 aa12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 ZSCAN29Q8IWY8 852 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 ANKRD13CQ8N6S4 541 aa12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 DIS3LQ8TF46 1054 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 FAM163AQ96GL9 167 aaPredicted RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 PAWRQ96IZ0 340 aaKnown RBP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 GDF15Q99988 308 aa12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
TNFAIP3-202ENST00000420009 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms