RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 FAM168AQ92567 244 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 CITED4Q96RK1 184 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 DUSP23Q9BVJ7 150 aa6.2□□□□□ -1.42
SDCBPP3-201ENST00000419629 GPR182O15218 404 aa6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 GADD45BO75293 160 aaPredicted RBP6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 FARP2O94887 1054 aaPredicted RBP6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 HCLS1P14317 486 aaPredicted RBP6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 GRM2Q14416 872 aa6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 IFI16Q16666 785 aaKnown RBP6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 AOC3Q16853 763 aa6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 TMEM40Q8WWA1 233 aa6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 PCOLCE2Q9UKZ9 415 aa6.19□□□□□ -1.42
SDCBPP3-201ENST00000419629 RNGTTO60942 597 aaKnown RBP6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 NEFMP07197 916 aa6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 EPS8L3Q8TE67 593 aaKnown RBP6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 HRASLS5Q96KN8 279 aa6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 NIF3L1Q9GZT8 377 aa6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
SDCBPP3-201ENST00000419629 TMEM265A0A087WTH1 108 aa6.17□□□□□ -1.42
SDCBPP3-201ENST00000419629 CEACAM5P06731 702 aa6.17□□□□□ -1.42
SDCBPP3-201ENST00000419629 FAM214BQ7L5A3 538 aa6.17□□□□□ -1.42
SDCBPP3-201ENST00000419629 TMEM39AQ9NV64 488 aa6.17□□□□□ -1.42
SDCBPP3-201ENST00000419629 FBLN7Q53RD9 439 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 ZC3H12AQ5D1E8 599 aaKnown RBP6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 SLC23A3Q6PIS1 610 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 SPOCD1Q6ZMY3 1216 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 STK35Q8TDR2 534 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 ISL2Q96A47 359 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 HEXIM2Q96MH2 286 aaKnown RBP6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 TNKS2Q9H2K2 1166 aa6.16□□□□□ -1.42
SDCBPP3-201ENST00000419629 PPP2R3AQ06190 1150 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 MESP2Q0VG99 397 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 ANGEL2Q5VTE6 544 aaKnown RBP6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 DTHD1Q6ZMT9 781 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 ARHGAP27Q6ZUM4 889 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 KSR1Q8IVT5 923 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 TOP6BLQ8N6T0 577 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 KCNB2Q92953 911 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 CSRNP1Q96S65 589 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 SNX11Q9Y5W9 270 aa6.15□□□□□ -1.42
SDCBPP3-201ENST00000419629 FCGRTP55899 365 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 ERVK-24P63145 666 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 PKN1Q16512 942 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 RETREG2Q8NC44 543 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 RNF214Q8ND24 703 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 FLAD1Q8NFF5 587 aa6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 SSU72Q9NP77 194 aaKnown RBP6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.43
SDCBPP3-201ENST00000419629 ITIH2P19823 946 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 ARNTP27540 789 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 ZNF252P-AS1Q0IIN9 211 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 PI16Q6UXB8 463 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 SULF2Q8IWU5 870 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 TMC1Q8TDI8 760 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 ALKBH8Q96BT7 664 aaKnown RBP6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 PRDM7Q9NQW5 492 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 CACNA2D2Q9NY47 1150 aa6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 GPN3Q9UHW5 284 aaPredicted RBP6.13□□□□□ -1.43
SDCBPP3-201ENST00000419629 ZNF503-AS2A6NEH8 195 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 IGF2BP3O00425 579 aaKnown RBP eCLIP6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 XRCC5P13010 732 aaKnown RBP6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 TXNDC2Q86VQ3 553 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 CILP2Q8IUL8 1156 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 GPBAR1Q8TDU6 330 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 FAM84AQ96KN4 292 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 PPP4R2Q9NY27 417 aa6.12□□□□□ -1.43
SDCBPP3-201ENST00000419629 NME2P22392 152 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 NTF4P34130 210 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 ZSWIM9Q86XI8 627 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 SPACA3Q8IXA5 215 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 ASB11Q8WXH4 323 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 DMRTB1Q96MA1 342 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 SLC38A3Q99624 504 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 RBCK1Q9BYM8 510 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 BCO2Q9BYV7 579 aa6.11□□□□□ -1.43
SDCBPP3-201ENST00000419629 LRRC10BA6NIK2 292 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 RING1Q06587 406 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 NKPD1Q17RQ9 610 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 MPRIPQ6WCQ1 1025 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 UBE3DQ7Z6J8 389 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 BHLHE22Q8NFJ8 381 aaPredicted RBP6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 PRDM10Q9NQV6 1147 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 NLRP2Q9NX02 1062 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 GTF2IRD1Q9UHL9 959 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 CTNND2Q9UQB3 1225 aa6.1□□□□□ -1.43
SDCBPP3-201ENST00000419629 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 ZP2Q05996 745 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 IKZF1Q13422 519 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 PPM1JQ5JR12 505 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 EMILIN2Q9BXX0 1053 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 FAM53CQ9NYF3 392 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 AKAP2Q9Y2D5 859 aa6.09□□□□□ -1.43
SDCBPP3-201ENST00000419629 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
SDCBPP3-201ENST00000419629 NXPE4Q6UWF7 544 aa6.08□□□□□ -1.44
SDCBPP3-201ENST00000419629 C3orf58Q8NDZ4 430 aa6.08□□□□□ -1.44
SDCBPP3-201ENST00000419629 GRIN3AQ8TCU5 1115 aa6.08□□□□□ -1.44
SDCBPP3-201ENST00000419629 CSADQ9Y600 493 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms