RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 ERO1BQ86YB8 467 aa19.45■□□□□ 0.7
NOD1-204ENST00000419601 CNKSR2Q8WXI2 1034 aa19.45■□□□□ 0.7
NOD1-204ENST00000419601 ZKSCAN4Q969J2 545 aaPredicted RBP19.45■□□□□ 0.7
NOD1-204ENST00000419601 OTUD5Q96G74 571 aa19.45■□□□□ 0.7
NOD1-204ENST00000419601 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
NOD1-204ENST00000419601 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
NOD1-204ENST00000419601 DOCK2Q92608 1830 aa19.45■□□□□ 0.7
NOD1-204ENST00000419601 TESPA1A2RU30 521 aaPredicted RBP19.44■□□□□ 0.7
NOD1-204ENST00000419601 IGF2BP3O00425 579 aaKnown RBP eCLIP19.44■□□□□ 0.7
NOD1-204ENST00000419601 RAB11FIP3O75154 756 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
NOD1-204ENST00000419601 GTF2A2P52657 109 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 PICALMQ13492 652 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 DGKZQ13574 1117 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 ZSCAN29Q8IWY8 852 aaPredicted RBP19.44■□□□□ 0.7
NOD1-204ENST00000419601 CLASRPQ8N2M8 674 aaKnown RBP19.44■□□□□ 0.7
NOD1-204ENST00000419601 MS4A4AQ96JQ5 239 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 DDX4Q9NQI0 724 aaKnown RBP19.44■□□□□ 0.7
NOD1-204ENST00000419601 ZNF112Q9UJU3 913 aa19.44■□□□□ 0.7
NOD1-204ENST00000419601 APBB1O00213 710 aa19.43■□□□□ 0.7
NOD1-204ENST00000419601 INPP5BP32019 993 aa19.43■□□□□ 0.7
NOD1-204ENST00000419601 ATRNL1Q5VV63 1379 aa19.43■□□□□ 0.7
NOD1-204ENST00000419601 GPR25O00155 361 aa19.42■□□□□ 0.7
NOD1-204ENST00000419601 BAG3O95817 575 aa19.42■□□□□ 0.7
NOD1-204ENST00000419601 SH3BP5LQ7L8J4 393 aa19.42■□□□□ 0.7
NOD1-204ENST00000419601 ZNF296Q8WUU4 475 aaPredicted RBP19.42■□□□□ 0.7
NOD1-204ENST00000419601 PIH1D3Q9NQM4 214 aaKnown RBP19.42■□□□□ 0.7
NOD1-204ENST00000419601 TNRC18O15417 2968 aaPredicted RBP19.42■□□□□ 0.7
NOD1-204ENST00000419601 MYO5AQ9Y4I1 1855 aaKnown RBP19.41■□□□□ 0.7
NOD1-204ENST00000419601 CCL15-CCL14A0A0B4J2E2 113 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 DDTLA6NHG4 134 aaPredicted RBP19.41■□□□□ 0.7
NOD1-204ENST00000419601 PLCG2P16885 1265 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 PPATQ06203 517 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 PPIL2Q13356 520 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 CCL15Q16663 113 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 CTU1Q7Z7A3 348 aaKnown RBP19.41■□□□□ 0.7
NOD1-204ENST00000419601 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
NOD1-204ENST00000419601 PTPN18Q99952 460 aa19.41■□□□□ 0.7
NOD1-204ENST00000419601 COL2A1P02458 1487 aaPredicted RBP19.41■□□□□ 0.7
NOD1-204ENST00000419601 IFIT2P09913 472 aaKnown RBP19.4■□□□□ 0.7
NOD1-204ENST00000419601 PPP4CP60510 307 aa19.4■□□□□ 0.7
NOD1-204ENST00000419601 MAP3K10Q02779 954 aa19.4■□□□□ 0.7
NOD1-204ENST00000419601 NOL9Q5SY16 702 aaKnown RBP19.4■□□□□ 0.7
NOD1-204ENST00000419601 TEX11Q8IYF3 940 aa19.4■□□□□ 0.7
NOD1-204ENST00000419601 BRI3BPQ8WY22 251 aa19.4■□□□□ 0.7
NOD1-204ENST00000419601 R3HDMLQ9H3Y0 253 aa19.4■□□□□ 0.7
NOD1-204ENST00000419601 AATFQ9NY61 560 aaKnown RBP eCLIP19.4■□□□□ 0.7
NOD1-204ENST00000419601 IRF6O14896 467 aa19.39■□□□□ 0.69
NOD1-204ENST00000419601 FKTNO75072 461 aa19.39■□□□□ 0.69
NOD1-204ENST00000419601 IDH1O75874 414 aaKnown RBP19.39■□□□□ 0.69
NOD1-204ENST00000419601 CETPP11597 493 aa19.39■□□□□ 0.69
NOD1-204ENST00000419601 SNAPC2Q13487 334 aa19.39■□□□□ 0.69
NOD1-204ENST00000419601 TMED8Q6PL24 325 aaPredicted RBP19.39■□□□□ 0.69
NOD1-204ENST00000419601 SH3RF3Q8TEJ3 882 aaPredicted RBP19.39■□□□□ 0.69
NOD1-204ENST00000419601 OSBPL5Q9H0X9 879 aaPredicted RBP19.39■□□□□ 0.69
NOD1-204ENST00000419601 PHF20L1A8MW92 1017 aa19.38■□□□□ 0.69
NOD1-204ENST00000419601 ADGRA1Q86SQ6 560 aa19.38■□□□□ 0.69
NOD1-204ENST00000419601 NDUFB9Q9Y6M9 179 aa19.38■□□□□ 0.69
NOD1-204ENST00000419601 PDE4DIPQ5VU43 2346 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 TBC1D12O60347 775 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 CYP7A1P22680 504 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 RRP1P56182 461 aaKnown RBP19.37■□□□□ 0.69
NOD1-204ENST00000419601 MAP3K12Q12852 859 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 CRHR2Q13324 411 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 TTF1Q15361 905 aaPredicted RBP19.37■□□□□ 0.69
NOD1-204ENST00000419601 CERS3Q8IU89 383 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.37■□□□□ 0.69
NOD1-204ENST00000419601 ANTXR1Q9H6X2 564 aa19.37■□□□□ 0.69
NOD1-204ENST00000419601 SCYL3Q8IZE3 742 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 LRRCC1Q9C099 1032 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 BCL11AQ9H165 835 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 ZCCHC17Q9NP64 241 aaKnown RBP19.36■□□□□ 0.69
NOD1-204ENST00000419601 PICK1Q9NRD5 415 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 KCNH4Q9UQ05 1017 aa19.36■□□□□ 0.69
NOD1-204ENST00000419601 CTNND1O60716 968 aaKnown RBP19.35■□□□□ 0.69
NOD1-204ENST00000419601 TAF1CQ15572 869 aaPredicted RBP19.35■□□□□ 0.69
NOD1-204ENST00000419601 PKN2Q16513 984 aaKnown RBP19.35■□□□□ 0.69
NOD1-204ENST00000419601 FAM43AQ8N2R8 423 aa19.35■□□□□ 0.69
NOD1-204ENST00000419601 DHX36Q9H2U1 1008 aaKnown RBP19.35■□□□□ 0.69
NOD1-204ENST00000419601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.35■□□□□ 0.69
NOD1-204ENST00000419601 CDK5RAP2Q96SN8 1893 aa19.35■□□□□ 0.69
NOD1-204ENST00000419601 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
NOD1-204ENST00000419601 TGFBRAP1Q8WUH2 860 aa19.34■□□□□ 0.69
NOD1-204ENST00000419601 ZFYVE28Q9HCC9 887 aa19.34■□□□□ 0.69
NOD1-204ENST00000419601 DOCK1Q14185 1865 aa19.34■□□□□ 0.69
NOD1-204ENST00000419601 FLT1P17948 1338 aa19.33■□□□□ 0.69
NOD1-204ENST00000419601 BTBD19C9JJ37 291 aa19.33■□□□□ 0.68
NOD1-204ENST00000419601 SLURP2P0DP57 97 aa19.33■□□□□ 0.68
NOD1-204ENST00000419601 PTPRAP18433 802 aa19.33■□□□□ 0.68
NOD1-204ENST00000419601 DNAJC2Q99543 621 aaKnown RBP19.33■□□□□ 0.68
NOD1-204ENST00000419601 PI4KBQ9UBF8 816 aa19.33■□□□□ 0.68
NOD1-204ENST00000419601 HERC5Q9UII4 1024 aaKnown RBP19.33■□□□□ 0.68
NOD1-204ENST00000419601 GOLIM4O00461 696 aa19.32■□□□□ 0.68
NOD1-204ENST00000419601 CXCL11O14625 94 aa19.32■□□□□ 0.68
NOD1-204ENST00000419601 ATP5JP18859 108 aa19.32■□□□□ 0.68
NOD1-204ENST00000419601 DYNLL1P63167 89 aaKnown RBP19.32■□□□□ 0.68
NOD1-204ENST00000419601 MAPKAPK5Q8IW41 473 aa19.32■□□□□ 0.68
NOD1-204ENST00000419601 MIGA1Q8NAN2 632 aa19.32■□□□□ 0.68
NOD1-204ENST00000419601 ERO1AQ96HE7 468 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms