RNA–Protein interactions for RNA: ENST00000419582.5

PTPA-213, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-213ENST00000419582 PTPRAP18433 802 aa19.1■□□□□ 0.65
PTPA-213ENST00000419582 SCYL3Q8IZE3 742 aa19.1■□□□□ 0.65
PTPA-213ENST00000419582 FRAT2O75474 233 aaPredicted RBP19.09■□□□□ 0.65
PTPA-213ENST00000419582 CHAF1AQ13111 956 aaPredicted RBP19.09■□□□□ 0.65
PTPA-213ENST00000419582 MAP3K21Q5TCX8 1036 aa19.09■□□□□ 0.65
PTPA-213ENST00000419582 SMCR8Q8TEV9 937 aaPredicted RBP19.09■□□□□ 0.65
PTPA-213ENST00000419582 DOCK3Q8IZD9 2030 aa19.08■□□□□ 0.65
PTPA-213ENST00000419582 ATRNL1Q5VV63 1379 aa19.08■□□□□ 0.65
PTPA-213ENST00000419582 GRM8O00222 908 aa19.08■□□□□ 0.64
PTPA-213ENST00000419582 PUS3Q9BZE2 481 aaKnown RBP19.08■□□□□ 0.64
PTPA-213ENST00000419582 IQSEC3Q9UPP2 1182 aaPredicted RBP19.08■□□□□ 0.64
PTPA-213ENST00000419582 AGTPBP1Q9UPW5 1226 aa19.08■□□□□ 0.64
PTPA-213ENST00000419582 PFASO15067 1338 aa19.07■□□□□ 0.64
PTPA-213ENST00000419582 CDC42EP5Q6NZY7 148 aa19.07■□□□□ 0.64
PTPA-213ENST00000419582 SYMPKQ92797 1274 aaKnown RBP19.07■□□□□ 0.64
PTPA-213ENST00000419582 PICK1Q9NRD5 415 aa19.07■□□□□ 0.64
PTPA-213ENST00000419582 FAM198AQ9UFP1 575 aa19.07■□□□□ 0.64
PTPA-213ENST00000419582 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
PTPA-213ENST00000419582 GADL1Q6ZQY3 521 aa19.06■□□□□ 0.64
PTPA-213ENST00000419582 ANKRD13CQ8N6S4 541 aa19.06■□□□□ 0.64
PTPA-213ENST00000419582 VGLL2Q8N8G2 317 aa19.06■□□□□ 0.64
PTPA-213ENST00000419582 WDR66Q8TBY9 1149 aa19.06■□□□□ 0.64
PTPA-213ENST00000419582 TSR2Q969E8 191 aaKnown RBP19.06■□□□□ 0.64
PTPA-213ENST00000419582 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
PTPA-213ENST00000419582 PNMA3Q9UL41 463 aa19.06■□□□□ 0.64
PTPA-213ENST00000419582 CTNND1O60716 968 aaKnown RBP19.05■□□□□ 0.64
PTPA-213ENST00000419582 PDE8BO95263 885 aa19.05■□□□□ 0.64
PTPA-213ENST00000419582 TCP10Q12799 353 aa19.05■□□□□ 0.64
PTPA-213ENST00000419582 NFIAQ12857 509 aa19.05■□□□□ 0.64
PTPA-213ENST00000419582 CCDC27Q2M243 656 aa19.05■□□□□ 0.64
PTPA-213ENST00000419582 DAGLAQ9Y4D2 1042 aa19.05■□□□□ 0.64
PTPA-213ENST00000419582 CACNA1FO60840 1977 aa19.04■□□□□ 0.64
PTPA-213ENST00000419582 XRCC5P13010 732 aaKnown RBP19.04■□□□□ 0.64
PTPA-213ENST00000419582 PROCA1Q8NCQ7 364 aaPredicted RBP19.04■□□□□ 0.64
PTPA-213ENST00000419582 IDI2Q9BXS1 227 aa19.04■□□□□ 0.64
PTPA-213ENST00000419582 CDH23Q9H251 3354 aa19.04■□□□□ 0.64
PTPA-213ENST00000419582 TAOK2Q9UL54 1235 aa19.04■□□□□ 0.64
PTPA-213ENST00000419582 ENTPD3O75355 529 aa19.03■□□□□ 0.64
PTPA-213ENST00000419582 ZNF697Q5TEC3 545 aa19.03■□□□□ 0.64
PTPA-213ENST00000419582 CDX2Q99626 313 aaPredicted RBP19.03■□□□□ 0.64
PTPA-213ENST00000419582 DDX60LQ5H9U9 1706 aaKnown RBP19.03■□□□□ 0.64
PTPA-213ENST00000419582 IL16Q14005 1332 aa19.02■□□□□ 0.64
PTPA-213ENST00000419582 ALDH1L1O75891 902 aa19.02■□□□□ 0.64
PTPA-213ENST00000419582 TRIM32Q13049 653 aa19.02■□□□□ 0.64
PTPA-213ENST00000419582 TRMT44Q8IYL2 757 aaKnown RBP19.02■□□□□ 0.64
PTPA-213ENST00000419582 KAZALD1Q96I82 304 aa19.02■□□□□ 0.64
PTPA-213ENST00000419582 BDP1A6H8Y1 2624 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 ZBTB22O15209 634 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 FGFR2P21802 821 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 LRRC26Q2I0M4 334 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
PTPA-213ENST00000419582 ZFPM1Q8IX07 1006 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 MAFAQ8NHW3 353 aaPredicted RBP19.01■□□□□ 0.63
PTPA-213ENST00000419582 TRIB2Q92519 343 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 SEMA6BQ9H3T3 888 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 USP40Q9NVE5 1235 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 C9orf78Q9NZ63 289 aaPredicted RBP19.01■□□□□ 0.63
PTPA-213ENST00000419582 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
PTPA-213ENST00000419582 F6X3S4 739 aa19■□□□□ 0.63
PTPA-213ENST00000419582 VAMP4O75379 141 aa19■□□□□ 0.63
PTPA-213ENST00000419582 COL9A1P20849 921 aa19■□□□□ 0.63
PTPA-213ENST00000419582 MDM2Q00987 491 aaPredicted RBP19■□□□□ 0.63
PTPA-213ENST00000419582 RABL6Q3YEC7 729 aaPredicted RBP19■□□□□ 0.63
PTPA-213ENST00000419582 LHX8Q68G74 356 aa19■□□□□ 0.63
PTPA-213ENST00000419582 TBC1D2Q9BYX2 928 aa19■□□□□ 0.63
PTPA-213ENST00000419582 LRRFIP2Q9Y608 721 aaKnown RBP19■□□□□ 0.63
PTPA-213ENST00000419582 UTYO14607 1347 aa19■□□□□ 0.63
PTPA-213ENST00000419582 PABPC4Q13310 644 aaKnown RBP eCLIP18.99■□□□□ 0.633e-7■■■■□ 24.1
PTPA-213ENST00000419582 METTL24Q5JXM2 366 aa18.99■□□□□ 0.63
PTPA-213ENST00000419582 TREML2Q5T2D2 321 aa18.99■□□□□ 0.63
PTPA-213ENST00000419582 PTPRFP10586 1907 aa18.99■□□□□ 0.63
PTPA-213ENST00000419582 TRIM75PA6NK02 468 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 TBC1D12O60347 775 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 IFIT1P09914 478 aaKnown RBP18.98■□□□□ 0.63
PTPA-213ENST00000419582 PRKAR2AP13861 404 aaKnown RBP18.98■□□□□ 0.63
PTPA-213ENST00000419582 DIXDC1Q155Q3 683 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 LRRC24Q50LG9 513 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 SH3BP5LQ7L8J4 393 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 FAM161BQ96MY7 647 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 LBHD1Q9BQE6 289 aaPredicted RBP18.98■□□□□ 0.63
PTPA-213ENST00000419582 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 NCOR1O75376 2440 aa18.98■□□□□ 0.63
PTPA-213ENST00000419582 PUM3Q15397 648 aaKnown RBP18.97■□□□□ 0.63
PTPA-213ENST00000419582 WWC1Q8IX03 1113 aa18.97■□□□□ 0.63
PTPA-213ENST00000419582 SOCS4Q8WXH5 440 aa18.97■□□□□ 0.63
PTPA-213ENST00000419582 AK9Q5TCS8 1911 aa18.96■□□□□ 0.63
PTPA-213ENST00000419582 RGS3P49796 1198 aa18.96■□□□□ 0.63
PTPA-213ENST00000419582 SH3D19Q5HYK7 790 aa18.96■□□□□ 0.63
PTPA-213ENST00000419582 USP6NLQ92738 828 aa18.96■□□□□ 0.63
PTPA-213ENST00000419582 SUCLG2Q96I99 432 aa18.96■□□□□ 0.63
PTPA-213ENST00000419582 PHIPQ8WWQ0 1821 aa18.95■□□□□ 0.62
PTPA-213ENST00000419582 RFX7Q2KHR2 1363 aa18.95■□□□□ 0.62
PTPA-213ENST00000419582 PRDX5P30044 214 aa18.95■□□□□ 0.62
PTPA-213ENST00000419582 SMAD3P84022 425 aaKnown RBP18.95■□□□□ 0.62
PTPA-213ENST00000419582 CACNB2Q08289 660 aaPredicted RBP18.95■□□□□ 0.62
PTPA-213ENST00000419582 FAM163AQ96GL9 167 aaPredicted RBP18.95■□□□□ 0.62
PTPA-213ENST00000419582 NUDT12Q9BQG2 462 aa18.95■□□□□ 0.62
PTPA-213ENST00000419582 ASCC2Q9H1I8 757 aaPredicted RBP18.95■□□□□ 0.62
PTPA-213ENST00000419582 NPM3O75607 178 aaKnown RBP18.94■□□□□ 0.62
PTPA-213ENST00000419582 LDHBP07195 334 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms