RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 MYBBP1AQ9BQG0 1328 aaKnown RBP13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 LTBP2Q14767 1821 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
RAPGEF1-205ENST00000419442 PHF20L1A8MW92 1017 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 COL9A1P20849 921 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 CHAF1AQ13111 956 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 FAM110CQ1W6H9 321 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 GJD2Q9UKL4 321 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 AFG3L2Q9Y4W6 797 aa13.33□□□□□ -0.28
RAPGEF1-205ENST00000419442 VCANP13611 3396 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 TRIM32Q13049 653 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 MAP3K21Q5TCX8 1036 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 ZNF697Q5TEC3 545 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 SCYL3Q8IZE3 742 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 SYMPKQ92797 1274 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 TAOK2Q9UL54 1235 aa13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 IQSEC3Q9UPP2 1182 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-205ENST00000419442 APAF1O14727 1248 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 PTPRAP18433 802 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 NFIAQ12857 509 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 GADL1Q6ZQY3 521 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 ANKRD13CQ8N6S4 541 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 FAM161BQ96MY7 647 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 PUS3Q9BZE2 481 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 AGTPBP1Q9UPW5 1226 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 ZHX2Q9Y6X8 837 aa13.31□□□□□ -0.28
RAPGEF1-205ENST00000419442 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 MAP3K10Q02779 954 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 FKBP5Q13451 457 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 TWISTNBQ3B726 338 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 CDC42EP5Q6NZY7 148 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 MROH5Q6ZUA9 1318 aa13.3□□□□□ -0.28
RAPGEF1-205ENST00000419442 TCP10Q12799 353 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 VPS37DQ86XT2 251 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 VGLL2Q8N8G2 317 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 TRIB2Q92519 343 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 PICK1Q9NRD5 415 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 KIF16BQ96L93 1317 aa13.29□□□□□ -0.28
RAPGEF1-205ENST00000419442 GRM8O00222 908 aa13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 GCLCP48506 637 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 CAVIN4Q5BKX8 364 aa13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 TSR2Q969E8 191 aaKnown RBP13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 SEMA6BQ9H3T3 888 aa13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
RAPGEF1-205ENST00000419442 ATAD5Q96QE3 1844 aa13.27□□□□□ -0.28
RAPGEF1-205ENST00000419442 FRAT2O75474 233 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-205ENST00000419442 ZFPM1Q8IX07 1006 aa13.27□□□□□ -0.29
RAPGEF1-205ENST00000419442 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
RAPGEF1-205ENST00000419442 CTNND1O60716 968 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 PDE8BO95263 885 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 XRCC5P13010 732 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 PLA2G5P39877 138 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 TREML2Q5T2D2 321 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 LHX8Q68G74 356 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 PROCA1Q8NCQ7 364 aaPredicted RBP13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 KAZALD1Q96I82 304 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 MORF4L1Q9UBU8 362 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 MYH2Q9UKX2 1941 aa13.26□□□□□ -0.29
RAPGEF1-205ENST00000419442 TNFRSF10AO00220 468 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 ENTPD3O75355 529 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 SH3BP5LQ7L8J4 393 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 WDR66Q8TBY9 1149 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 MYLIPQ8WY64 445 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 LBHD1Q9BQE6 289 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 TTYH1Q9H313 450 aaPredicted RBP13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 EYSQ5T1H1 3165 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 RLFQ13129 1914 aa13.25□□□□□ -0.29
RAPGEF1-205ENST00000419442 TRIM75PA6NK02 468 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 F6X3S4 739 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 FGFR2P21802 821 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 DIXDC1Q155Q3 683 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 TJAP1Q5JTD0 557 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 USP40Q9NVE5 1235 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 RAPGEFL1Q9UHV5 662 aa13.24□□□□□ -0.29
RAPGEF1-205ENST00000419442 CYP2B6P20813 491 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 RGS3P49796 1198 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 SMAD3P84022 425 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 RABL6Q3YEC7 729 aaPredicted RBP13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 LRRC24Q50LG9 513 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 METTL24Q5JXM2 366 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 SOCS4Q8WXH5 440 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 PRUNE2Q8WUY3 3088 aa13.23□□□□□ -0.29
RAPGEF1-205ENST00000419442 TMEM265A0A087WTH1 108 aa13.22□□□□□ -0.29
RAPGEF1-205ENST00000419442 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
RAPGEF1-205ENST00000419442 FOSL2P15408 326 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms