RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
RFC1-203ENST00000418436 DEFB129Q9H1M3 183 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 PPP2R3BQ9Y5P8 575 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 TLL2Q9Y6L7 1015 aa12.85□□□□□ -0.35
RFC1-203ENST00000418436 FKBP1CQ5VVH2 108 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
RFC1-203ENST00000418436 SLF2Q8IX21 1173 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
RFC1-203ENST00000418436 KLRG1Q96E93 195 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 ZNF408Q9H9D4 720 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 VEZTQ9HBM0 779 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 PAPPA2Q9BXP8 1791 aa12.84□□□□□ -0.35
RFC1-203ENST00000418436 CNTNAP1P78357 1384 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 ATP5JP18859 108 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 TNFAIP1Q13829 316 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 RASA3Q14644 834 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 HHIPL1Q96JK4 782 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 GBA2Q9HCG7 927 aaPredicted RBP12.83□□□□□ -0.36
RFC1-203ENST00000418436 PIH1D3Q9NQM4 214 aaKnown RBP12.83□□□□□ -0.36
RFC1-203ENST00000418436 LRP2BPQ9P2M1 347 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 MROH7-TTC4A0A0A0MT08 1334 aa12.83□□□□□ -0.36
RFC1-203ENST00000418436 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 LDHCP07864 332 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 FKBP1BP68106 108 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 GSTO1P78417 241 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 DSG2Q14126 1118 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 CDC42EP5Q6NZY7 148 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 FAM83AQ86UY5 434 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 C2orf69Q8N8R5 385 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 TEPSINQ96N21 525 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 RAI14Q9P0K7 980 aa12.82□□□□□ -0.36
RFC1-203ENST00000418436 ABT1Q9ULW3 272 aaKnown RBP12.82□□□□□ -0.36
RFC1-203ENST00000418436 SSC5DA1L4H1 1573 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 TCP10L2B9ZVM9 353 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 TNNI2P48788 182 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 CACNB3P54284 484 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 KHSRPQ92945 711 aaKnown RBP eCLIP12.81□□□□□ -0.36
RFC1-203ENST00000418436 RWDD1Q9H446 243 aaPredicted RBP12.81□□□□□ -0.36
RFC1-203ENST00000418436 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 USP40Q9NVE5 1235 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 TMOD2Q9NZR1 351 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 MKRN1Q9UHC7 482 aaKnown RBP12.81□□□□□ -0.36
RFC1-203ENST00000418436 PCDHGA4Q9Y5G9 962 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
RFC1-203ENST00000418436 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 MAP4K4O95819 1239 aaPredicted RBP12.8□□□□□ -0.36
RFC1-203ENST00000418436 IGHDP01880 384 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 NF2P35240 595 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 IRX6P78412 446 aaPredicted RBP12.8□□□□□ -0.36
RFC1-203ENST00000418436 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 NBPF12Q5TAG4 269 aaPredicted RBP12.8□□□□□ -0.36
RFC1-203ENST00000418436 TMED8Q6PL24 325 aaPredicted RBP12.8□□□□□ -0.36
RFC1-203ENST00000418436 JMYQ8N9B5 988 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 HAUS7Q99871 368 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 IDI2Q9BXS1 227 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 TMEM39BQ9GZU3 492 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 ECHDC1Q9NTX5 307 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 THSD7BQ9C0I4 1608 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
RFC1-203ENST00000418436 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 BTDP43251 543 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 VEGFBP49765 207 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 HUNKP57058 714 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 RHBDL3P58872 404 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 PPP4CP60510 307 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 NFIAQ12857 509 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 TTF1Q15361 905 aaPredicted RBP12.79□□□□□ -0.36
RFC1-203ENST00000418436 MAP3K11Q16584 847 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
RFC1-203ENST00000418436 NAA16Q6N069 864 aaPredicted RBP12.79□□□□□ -0.36
RFC1-203ENST00000418436 FAM151AQ8WW52 585 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 BOLA2Q9H3K6 86 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 FAM198AQ9UFP1 575 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 MYH7P12883 1935 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 SALL3Q9BXA9 1300 aa12.79□□□□□ -0.36
RFC1-203ENST00000418436 RPAP1Q9BWH6 1393 aaPredicted RBP12.79□□□□□ -0.36
RFC1-203ENST00000418436 GOLIM4O00461 696 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 WDHD1O75717 1129 aaPredicted RBP12.78□□□□□ -0.36
RFC1-203ENST00000418436 IDH1O75874 414 aaKnown RBP12.78□□□□□ -0.36
RFC1-203ENST00000418436 MAP3K12Q12852 859 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 ADGRA1Q86SQ6 560 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 PAG1Q9NWQ8 432 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 TTC41PQ6P2S7 1318 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 WDR33Q9C0J8 1336 aaKnown RBP12.78□□□□□ -0.36
RFC1-203ENST00000418436 AK9Q5TCS8 1911 aa12.78□□□□□ -0.36
RFC1-203ENST00000418436 UBE2Q2LH0YL09 131 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 ENTPD3O75355 529 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
RFC1-203ENST00000418436 ECE1P42892 770 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 LDLRAD1Q5T700 205 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms