RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CYP27B1O15528 508 aa14.99□□□□□ -0.01
BDNF-208ENST00000418212 ZNF589Q86UQ0 364 aaPredicted RBP14.99□□□□□ -0.01
BDNF-208ENST00000418212 LZTFL1Q9NQ48 299 aa14.99□□□□□ -0.01
BDNF-208ENST00000418212 TXKP42681 527 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 HAUS7Q99871 368 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 SEPT7Q16181 437 aaKnown RBP14.98□□□□□ -0.01
BDNF-208ENST00000418212 LLPHQ9BRT6 129 aaKnown RBP14.98□□□□□ -0.01
BDNF-208ENST00000418212 CLEC11AQ9Y240 323 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
BDNF-208ENST00000418212 MAP3K15Q6ZN16 1313 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 DSCC1Q9BVC3 393 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 WDR17Q8IZU2 1322 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 KDM5DQ9BY66 1539 aa14.98□□□□□ -0.01
BDNF-208ENST00000418212 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
BDNF-208ENST00000418212 NPHP4O75161 1426 aaPredicted RBP14.97□□□□□ -0.01
BDNF-208ENST00000418212 ZNF202O95125 648 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 CYP21A2P08686 494 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 MYL5Q02045 173 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 CHRNDQ07001 517 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 FNBP4Q8N3X1 1017 aaPredicted RBP14.97□□□□□ -0.01
BDNF-208ENST00000418212 GTF3C6Q969F1 213 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 USP28Q96RU2 1077 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 PRDM4Q9UKN5 801 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 GSTTP1A0A1W2PQM5 241 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 BRD2P25440 801 aaKnown RBP14.97□□□□□ -0.01
BDNF-208ENST00000418212 PRKG1Q13976 671 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 CCDC174Q6PII3 467 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 STXBP4Q6ZWJ1 553 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 IFNL3Q8IZI9 196 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 LARGE2Q8N3Y3 721 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 KIF24Q5T7B8 1368 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 RAD51AP2Q09MP3 1159 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 CPXCR1Q8N123 301 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 PIGBQ92521 554 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 VPS16Q9H269 839 aa14.97□□□□□ -0.01
BDNF-208ENST00000418212 ZCCHC11Q5TAX3 1644 aaKnown RBP14.97□□□□□ -0.01
BDNF-208ENST00000418212 ATP7BP35670 1465 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 LRRIQ1Q96JM4 1722 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 PREX2Q70Z35 1606 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 MRPL12P52815 198 aaKnown RBP14.96□□□□□ -0.01
BDNF-208ENST00000418212 UBXN1Q04323 297 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 LRRC27Q9C0I9 530 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 STAP2Q9UGK3 403 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 ELP1O95163 1332 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 U2AF2P26368 475 aaKnown RBP eCLIP14.96□□□□□ -0.01
BDNF-208ENST00000418212 CETN2P41208 172 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 SLC1A4P43007 532 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 KIAA0825Q8IV33 1275 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 ZNF654Q8IZM8 581 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 CTAGE1Q96RT6 745 aa14.96□□□□□ -0.01
BDNF-208ENST00000418212 CHMP2AO43633 222 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 SASH1O94885 1247 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 GBP3Q9H0R5 595 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 ZSWIM6Q9HCJ5 1215 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 GOPCQ9HD26 462 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.02
BDNF-208ENST00000418212 TTF2Q9UNY4 1162 aaKnown RBP14.96□□□□□ -0.02
BDNF-208ENST00000418212 MTMR6Q9Y217 621 aa14.96□□□□□ -0.02
BDNF-208ENST00000418212 WDHD1O75717 1129 aaPredicted RBP14.95□□□□□ -0.02
BDNF-208ENST00000418212 PTPN12Q05209 780 aaKnown RBP14.95□□□□□ -0.02
BDNF-208ENST00000418212 CHD1O14646 1710 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 POLD1P28340 1107 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 SCNN1DP51172 638 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 PPARAQ07869 468 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 DOK7Q18PE1 504 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 ALS2CR12Q96Q35 445 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 H0YIN7 160 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 SLFNL1Q499Z3 407 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 NBPF14Q5TI25 921 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 MYSM1Q5VVJ2 828 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 SYNE4Q8N205 404 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 MAP4K1Q92918 833 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 LSG1Q9H089 658 aaKnown RBP14.95□□□□□ -0.02
BDNF-208ENST00000418212 STK32BQ9NY57 414 aa14.95□□□□□ -0.02
BDNF-208ENST00000418212 ZNF500O60304 480 aaPredicted RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 EPHA10Q5JZY3 1008 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 TTC38Q5R3I4 469 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 MYRIPQ8NFW9 859 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 CBX8Q9HC52 389 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 BCCIPQ9P287 314 aaKnown RBP eCLIP14.94□□□□□ -0.02
BDNF-208ENST00000418212 BTBD18B2RXH4 712 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 CYLC1P35663 651 aaPredicted RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 UTP14CQ5TAP6 766 aaKnown RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 FAM196AQ6ZSG2 479 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 CCDC42Q96M95 316 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 TIGD1Q96MW7 591 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 GUCA1BQ9UMX6 200 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.94□□□□□ -0.02
BDNF-208ENST00000418212 GOLGA6L9A6NEM1 432 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 CCNT1O60563 726 aaKnown RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 IRX3P78415 501 aaPredicted RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 TRAF1Q13077 416 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 BRINP3Q76B58 766 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 ABCC3O15438 1527 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 USH1GQ495M9 461 aa14.94□□□□□ -0.02
BDNF-208ENST00000418212 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
BDNF-208ENST00000418212 TNKSO95271 1327 aa14.93□□□□□ -0.02
BDNF-208ENST00000418212 TRAF5O00463 557 aa14.93□□□□□ -0.02
BDNF-208ENST00000418212 GOLGA8HP0CJ92 632 aa14.93□□□□□ -0.02
BDNF-208ENST00000418212 ARID4AP29374 1257 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms