RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 HUNKP57058 714 aa15.11■□□□□ 0.01
SKA1-203ENST00000417656 SAPCD2Q86UD0 394 aa15.11■□□□□ 0.01
SKA1-203ENST00000417656 ZFPM1Q8IX07 1006 aa15.11■□□□□ 0.01
SKA1-203ENST00000417656 KBTBD3Q8NAB2 608 aa15.11■□□□□ 0.01
SKA1-203ENST00000417656 SIPA1L1O43166 1804 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 RASSF10A6NK89 507 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 ENTPD3O75355 529 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 PLCG2P16885 1265 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 PPP4CP60510 307 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 SUPT20HL1Q3ZLR7 823 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 TMED8Q6PL24 325 aaPredicted RBP15.1■□□□□ 0.01
SKA1-203ENST00000417656 PAXIP1Q6ZW49 1069 aaPredicted RBP15.1■□□□□ 0.01
SKA1-203ENST00000417656 PLEKHM2Q8IWE5 1019 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 FAM151AQ8WW52 585 aa15.1■□□□□ 0.01
SKA1-203ENST00000417656 COL2A1P02458 1487 aaPredicted RBP15.09■□□□□ 0.01
SKA1-203ENST00000417656 MAGEB6P1A0A0J9YX57 407 aa15.09■□□□□ 0.01
SKA1-203ENST00000417656 FKBP1BP68106 108 aa15.09■□□□□ 0.01
SKA1-203ENST00000417656 RIOK1Q9BRS2 568 aaKnown RBP15.09■□□□□ 0.01
SKA1-203ENST00000417656 FSD1Q9BTV5 496 aa15.09■□□□□ 0.01
SKA1-203ENST00000417656 ANGEL1Q9UNK9 670 aaKnown RBP15.09■□□□□ 0.01
SKA1-203ENST00000417656 FLT1P17948 1338 aa15.09■□□□□ 0.01
SKA1-203ENST00000417656 MYH1P12882 1939 aa15.08■□□□□ 0
SKA1-203ENST00000417656 UBE2Q2LH0YL09 131 aa15.08■□□□□ 0
SKA1-203ENST00000417656 UBE3CQ15386 1083 aa15.08■□□□□ 0
SKA1-203ENST00000417656 DEFB115Q30KQ5 88 aa15.08■□□□□ 0
SKA1-203ENST00000417656 ZSCAN25Q6NSZ9 544 aa15.08■□□□□ 0
SKA1-203ENST00000417656 CYP4F22Q6NT55 531 aa15.08■□□□□ 0
SKA1-203ENST00000417656 CENPQQ7L2Z9 268 aaPredicted RBP15.08■□□□□ 0
SKA1-203ENST00000417656 SH3BP5LQ7L8J4 393 aa15.08■□□□□ 0
SKA1-203ENST00000417656 ARMC9Q7Z3E5 817 aa15.08■□□□□ 0
SKA1-203ENST00000417656 MAPKAPK5Q8IW41 473 aa15.08■□□□□ 0
SKA1-203ENST00000417656 LCORLQ8N3X6 602 aa15.08■□□□□ 0
SKA1-203ENST00000417656 KLRG1Q96E93 195 aa15.08■□□□□ 0
SKA1-203ENST00000417656 OSBPL5Q9H0X9 879 aaPredicted RBP15.08■□□□□ 0
SKA1-203ENST00000417656 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
SKA1-203ENST00000417656 DDTLA6NHG4 134 aaPredicted RBP15.07■□□□□ 0
SKA1-203ENST00000417656 PPP1R12BO60237 982 aaPredicted RBP15.07■□□□□ 0
SKA1-203ENST00000417656 MBD4O95243 580 aa15.07■□□□□ 0
SKA1-203ENST00000417656 GRM1Q13255 1194 aa15.07■□□□□ 0
SKA1-203ENST00000417656 CERS3Q8IU89 383 aa15.07■□□□□ 0
SKA1-203ENST00000417656 ZSCAN29Q8IWY8 852 aaPredicted RBP15.07■□□□□ 0
SKA1-203ENST00000417656 DNAJC5GQ8N7S2 189 aa15.07■□□□□ 0
SKA1-203ENST00000417656 TGFBRAP1Q8WUH2 860 aa15.07■□□□□ 0
SKA1-203ENST00000417656 CCDC136Q96JN2 1154 aa15.07■□□□□ 0
SKA1-203ENST00000417656 CSRNP1Q96S65 589 aa15.07■□□□□ 0
SKA1-203ENST00000417656 OSBPL3Q9H4L5 887 aa15.07■□□□□ 0
SKA1-203ENST00000417656 ARMT1Q9H993 441 aa15.07■□□□□ 0
SKA1-203ENST00000417656 CEP350Q5VT06 3117 aa15.07■□□□□ 0
SKA1-203ENST00000417656 RNF113AO15541 343 aaKnown RBP15.06■□□□□ 0
SKA1-203ENST00000417656 USP5P45974 858 aa15.06■□□□□ 0
SKA1-203ENST00000417656 VEGFBP49765 207 aa15.06■□□□□ 0
SKA1-203ENST00000417656 MAP3K11Q16584 847 aa15.06■□□□□ 0
SKA1-203ENST00000417656 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
SKA1-203ENST00000417656 EVI5LQ96CN4 794 aa15.06■□□□□ 0
SKA1-203ENST00000417656 HHIPL1Q96JK4 782 aa15.06■□□□□ 0
SKA1-203ENST00000417656 CAPNS2Q96L46 248 aa15.06■□□□□ 0
SKA1-203ENST00000417656 TRIM6-TRIM34B2RNG4 842 aa15.05■□□□□ -0
SKA1-203ENST00000417656 USP2O75604 605 aaPredicted RBP15.05■□□□□ -0
SKA1-203ENST00000417656 ZFYP08048 801 aaPredicted RBP15.05■□□□□ -0
SKA1-203ENST00000417656 SLURP2P0DP57 97 aa15.05■□□□□ -0
SKA1-203ENST00000417656 IREB2P48200 963 aaKnown RBP15.05■□□□□ -0
SKA1-203ENST00000417656 SLC4A8Q2Y0W8 1093 aa15.05■□□□□ -0
SKA1-203ENST00000417656 DCAF15Q66K64 600 aa15.05■□□□□ -0
SKA1-203ENST00000417656 RGMBQ6NW40 437 aa15.05■□□□□ -0
SKA1-203ENST00000417656 MIGA2Q7L4E1 593 aa15.05■□□□□ -0
SKA1-203ENST00000417656 APPBP2Q92624 585 aa15.05■□□□□ -0
SKA1-203ENST00000417656 HOOK2Q96ED9 719 aa15.05■□□□□ -0
SKA1-203ENST00000417656 CLMNQ96JQ2 1002 aa15.05■□□□□ -0
SKA1-203ENST00000417656 CRNKL1Q9BZJ0 848 aaKnown RBP15.05■□□□□ -0
SKA1-203ENST00000417656 PUS7LQ9H0K6 701 aaKnown RBP15.05■□□□□ -0
SKA1-203ENST00000417656 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.05■□□□□ -0
SKA1-203ENST00000417656 SAP30BPQ9UHR5 308 aaKnown RBP15.05■□□□□ -0
SKA1-203ENST00000417656 DOCK1Q14185 1865 aa15.05■□□□□ -0
SKA1-203ENST00000417656 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ -0
SKA1-203ENST00000417656 LAMB1P07942 1786 aa15.04■□□□□ -0
SKA1-203ENST00000417656 WDR33Q9C0J8 1336 aaKnown RBP15.04■□□□□ -0
SKA1-203ENST00000417656 M0R2C6 588 aa15.04■□□□□ -0
SKA1-203ENST00000417656 ECE1P42892 770 aa15.04■□□□□ -0
SKA1-203ENST00000417656 ZNF157P51786 506 aaPredicted RBP15.04■□□□□ -0
SKA1-203ENST00000417656 LRRFIP1Q32MZ4 808 aaKnown RBP15.04■□□□□ -0
SKA1-203ENST00000417656 LDLRAD1Q5T700 205 aa15.04■□□□□ -0
SKA1-203ENST00000417656 SKAP1Q86WV1 359 aa15.04■□□□□ -0
SKA1-203ENST00000417656 RASAL3Q86YV0 1011 aa15.04■□□□□ -0
SKA1-203ENST00000417656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.04■□□□□ -0
SKA1-203ENST00000417656 SDR42E1Q8WUS8 393 aa15.04■□□□□ -0
SKA1-203ENST00000417656 OSBP2Q969R2 916 aa15.04■□□□□ -0
SKA1-203ENST00000417656 AIDAQ96BJ3 306 aa15.04■□□□□ -0
SKA1-203ENST00000417656 ZNF341Q9BYN7 854 aa15.04■□□□□ -0
SKA1-203ENST00000417656 ATAD5Q96QE3 1844 aa15.03■□□□□ -0
SKA1-203ENST00000417656 FAM196BA6NMK8 535 aa15.03■□□□□ -0
SKA1-203ENST00000417656 PRKAB2O43741 272 aa15.03■□□□□ -0
SKA1-203ENST00000417656 AOC2O75106 756 aa15.03■□□□□ -0
SKA1-203ENST00000417656 SLC10A3P09131 477 aa15.03■□□□□ -0
SKA1-203ENST00000417656 GSPT1P15170 499 aaKnown RBP15.03■□□□□ -0
SKA1-203ENST00000417656 TTC22Q5TAA0 569 aa15.03■□□□□ -0
SKA1-203ENST00000417656 RILPL2Q969X0 211 aa15.03■□□□□ -0
SKA1-203ENST00000417656 WRNIP1Q96S55 665 aa15.03■□□□□ -0
SKA1-203ENST00000417656 FAM155AB1AL88 458 aaPredicted RBP15.02■□□□□ -0
SKA1-203ENST00000417656 VGLL4Q14135 290 aa15.02■□□□□ -0
SKA1-203ENST00000417656 ZMYM1Q5SVZ6 1142 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms