RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
SCAF8-203ENST00000417268 CNNM3Q8NE01 707 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
SCAF8-203ENST00000417268 SLIT1O75093 1534 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 LRRC7Q96NW7 1537 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 PPEF1O14829 653 aaPredicted RBP14.59□□□□□ -0.07
SCAF8-203ENST00000417268 SUSD4Q5VX71 490 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 INTS4Q96HW7 963 aaKnown RBP14.59□□□□□ -0.07
SCAF8-203ENST00000417268 DSCC1Q9BVC3 393 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 POTEB2H3BUK9 544 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 SEMA3EO15041 775 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 RPS6KB1P23443 525 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 MNAT1P51948 309 aa14.59□□□□□ -0.07
SCAF8-203ENST00000417268 EDC3Q96F86 508 aaKnown RBP14.59□□□□□ -0.07
SCAF8-203ENST00000417268 KCNQ2O43526 872 aa14.58□□□□□ -0.07
SCAF8-203ENST00000417268 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.07
SCAF8-203ENST00000417268 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.07
SCAF8-203ENST00000417268 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 H7C1D1 291 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 RIOK3O14730 519 aaKnown RBP14.58□□□□□ -0.08
SCAF8-203ENST00000417268 F13A1P00488 732 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 SEC31BQ9NQW1 1179 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 ANGEL1Q9UNK9 670 aaKnown RBP14.58□□□□□ -0.08
SCAF8-203ENST00000417268 GOLGA6L9A6NEM1 432 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 MCM3P25205 808 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 TYRO3Q06418 890 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 SYCP1Q15431 976 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 BARGINQ6ZT62 677 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 ZKSCAN3Q9BRR0 538 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 MMP10P09238 476 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 PDE6AP16499 860 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 AMPD3Q01432 767 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 MCM6Q14566 821 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 TAX1BP1Q86VP1 789 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 STAP2Q9UGK3 403 aa14.58□□□□□ -0.08
SCAF8-203ENST00000417268 PARP1P09874 1014 aaKnown RBP14.57□□□□□ -0.08
SCAF8-203ENST00000417268 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 PPP1R12BO60237 982 aaPredicted RBP14.57□□□□□ -0.08
SCAF8-203ENST00000417268 GNA11P29992 359 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 HLFQ16534 295 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 RNF187Q5TA31 235 aaPredicted RBP14.57□□□□□ -0.08
SCAF8-203ENST00000417268 RSPH14Q9UHP6 348 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 DBNLQ9UJU6 430 aaKnown RBP14.57□□□□□ -0.08
SCAF8-203ENST00000417268 PTPDC1A2A3K4 754 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 IRX3P78415 501 aaPredicted RBP14.57□□□□□ -0.08
SCAF8-203ENST00000417268 ISM2Q6H9L7 571 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 SMARCC2Q8TAQ2 1214 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 KCNG4Q8TDN1 519 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 SNX14Q9Y5W7 946 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 ARHGAP23Q9P227 1491 aa14.57□□□□□ -0.08
SCAF8-203ENST00000417268 PRDM1O75626 825 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 PHKA1P46020 1223 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 TTLL11Q8NHH1 800 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 TSC1Q92574 1164 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 ARHGEF10LQ9HCE6 1279 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 PICK1Q9NRD5 415 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 COL15A1P39059 1388 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 GPR162Q16538 588 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 CC2D2BQ6DHV5 1058 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 PTPN12Q05209 780 aaKnown RBP14.56□□□□□ -0.08
SCAF8-203ENST00000417268 TXNRD1Q16881 649 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 KANK3Q6NY19 840 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 TGFBRAP1Q8WUH2 860 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 USP40Q9NVE5 1235 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 B4DLN1 442 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 MRPL12P52815 198 aaKnown RBP14.56□□□□□ -0.08
SCAF8-203ENST00000417268 TNFAIP1Q13829 316 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 DOK7Q18PE1 504 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 CTR9Q6PD62 1173 aa14.56□□□□□ -0.08
SCAF8-203ENST00000417268 ARPP21Q9UBL0 812 aaPredicted RBP14.56□□□□□ -0.08
SCAF8-203ENST00000417268 IQGAP1P46940 1657 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 IGKV5-2P06315 115 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 IVLP07476 585 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 MROH1Q8NDA8 1641 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 MST1RQ04912 1400 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 SPATA31A5Q5VU36 1347 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 SPATA31A7Q8IWB4 1347 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 CPDO75976 1380 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 SPDYE3A6NKU9 549 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 C10orf67Q8IYJ2 551 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 GTF3C6Q969F1 213 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 TRIM75PA6NK02 468 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 CPA1P15085 419 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 NPR1P16066 1061 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 MATR3P43243 847 aaKnown RBP eCLIP14.55□□□□□ -0.082e-6■■■□□ 15.9
SCAF8-203ENST00000417268 UBE3CQ15386 1083 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 LRRC27Q9C0I9 530 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 SAMM50Q9Y512 469 aa14.55□□□□□ -0.08
SCAF8-203ENST00000417268 CAPN2P17655 700 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 GRAPQ13588 217 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 GRAPLQ8TC17 118 aaPredicted RBP14.54□□□□□ -0.08
SCAF8-203ENST00000417268 PPLO60437 1756 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
SCAF8-203ENST00000417268 RXRAP19793 462 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 PPP2R5BQ15173 497 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 DPY19L2Q6NUT2 758 aa14.54□□□□□ -0.08
SCAF8-203ENST00000417268 LUZP1Q86V48 1076 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms