RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 TEX11Q8IYF3 940 aa17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 OPTNQ96CV9 577 aa17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 DNAJC2Q99543 621 aaKnown RBP17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 RNF186Q9NXI6 227 aa17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 PCDHB15Q9Y5E8 787 aa17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 ATRNL1Q5VV63 1379 aa17.26■□□□□ 0.35
SLC13A3-205ENST00000417157 CYP7A1P22680 504 aa17.25■□□□□ 0.35
SLC13A3-205ENST00000417157 COL13A1Q5TAT6 717 aaPredicted RBP17.25■□□□□ 0.35
SLC13A3-205ENST00000417157 MIGA2Q7L4E1 593 aa17.25■□□□□ 0.35
SLC13A3-205ENST00000417157 MAGEB6Q8N7X4 407 aa17.25■□□□□ 0.35
SLC13A3-205ENST00000417157 DDX4Q9NQI0 724 aaKnown RBP17.25■□□□□ 0.35
SLC13A3-205ENST00000417157 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 GOLIM4O00461 696 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 TRPA1O75762 1119 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 OTUD7BQ6GQQ9 843 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 ERO1BQ86YB8 467 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 OSBPL5Q9H0X9 879 aaPredicted RBP17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 DHX36Q9H2U1 1008 aaKnown RBP17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 ECHDC1Q9NTX5 307 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 PAG1Q9NWQ8 432 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
SLC13A3-205ENST00000417157 GTF2A2P52657 109 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 ADGRA1Q86SQ6 560 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 ZFPM1Q8IX07 1006 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 TNS4Q8IZW8 715 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 TSKSQ9UJT2 592 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 ZNF112Q9UJU3 913 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 SNCAIPQ9Y6H5 919 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 DOCK2Q92608 1830 aa17.23■□□□□ 0.35
SLC13A3-205ENST00000417157 DDTLA6NHG4 134 aaPredicted RBP17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 HDAC1Q13547 482 aaPredicted RBP17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 NOL9Q5SY16 702 aaKnown RBP17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 SLC9C2Q5TAH2 1124 aa17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 OTUD5Q96G74 571 aa17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 HAUS7Q99871 368 aa17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 PCNTO95613 3336 aa17.22■□□□□ 0.35
SLC13A3-205ENST00000417157 TBC1D12O60347 775 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 MAP3K10Q02779 954 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 PPATQ06203 517 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 SH3BP5LQ7L8J4 393 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 IFNL1Q8IU54 200 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.35
SLC13A3-205ENST00000417157 FLT1P17948 1338 aa17.21■□□□□ 0.34
SLC13A3-205ENST00000417157 TESPA1A2RU30 521 aaPredicted RBP17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 HLA-DOAP06340 250 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 PDE6AP16499 860 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 INPP5BP32019 993 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 GJA5P36382 358 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 PPIL2Q13356 520 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 SNAPC2Q13487 334 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 ZSCAN25Q6NSZ9 544 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 MIGA1Q8NAN2 632 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 PI4KBQ9UBF8 816 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 HERC5Q9UII4 1024 aaKnown RBP17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 LAMB1P07942 1786 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 TTC41PQ6P2S7 1318 aa17.2■□□□□ 0.34
SLC13A3-205ENST00000417157 MAGEB6P1A0A0J9YX57 407 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 ERC2O15083 957 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 CTNND1O60716 968 aaKnown RBP17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 CETPP11597 493 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 USP5P45974 858 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 NOM1Q5C9Z4 860 aaKnown RBP17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 SCYL3Q8IZE3 742 aa17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 RWDD1Q9H446 243 aaPredicted RBP17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.19■□□□□ 0.342e-7■■□□□ 12.6
SLC13A3-205ENST00000417157 SUPT16HQ9Y5B9 1047 aaKnown RBP17.19■□□□□ 0.34
SLC13A3-205ENST00000417157 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
SLC13A3-205ENST00000417157 CCL15-CCL14A0A0B4J2E2 113 aa17.18■□□□□ 0.34
SLC13A3-205ENST00000417157 DYNLL1P63167 89 aaKnown RBP17.18■□□□□ 0.34
SLC13A3-205ENST00000417157 CCL15Q16663 113 aa17.18■□□□□ 0.34
SLC13A3-205ENST00000417157 ZNF532Q9HCE3 1301 aa17.18■□□□□ 0.34
SLC13A3-205ENST00000417157 PHF20L1A8MW92 1017 aa17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 IRF6O14896 467 aa17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 CRACR2BQ8N4Y2 399 aaPredicted RBP17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 MS4A4AQ96JQ5 239 aa17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 CRNKL1Q9BZJ0 848 aaKnown RBP17.17■□□□□ 0.34
SLC13A3-205ENST00000417157 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 MX1P20591 662 aa17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 ADD2P35612 726 aa17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 UBE3CQ15386 1083 aa17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 EDC3Q96F86 508 aaKnown RBP17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 RIOK1Q9BRS2 568 aaKnown RBP17.16■□□□□ 0.34
SLC13A3-205ENST00000417157 TBC1D2Q9BYX2 928 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms