RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 MCAMP43121 646 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 ARHGEF6Q15052 776 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 PI16Q6UXB8 463 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 TBC1D9Q6ZT07 1266 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 EFCC1Q9HA90 598 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 RAI14Q9P0K7 980 aa21.62■■□□□ 1.05
PDLIM2-208ENST00000416159 RFX7Q2KHR2 1363 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 NPM3O75607 178 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 MS4A1P11836 297 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 RHBDL3P58872 404 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 MAP3K10Q02779 954 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 TTC39AQ5SRH9 613 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 ZNF384Q8TF68 577 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 DDX4Q9NQI0 724 aaKnown RBP21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 LRP2BPQ9P2M1 347 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 KCNH4Q9UQ05 1017 aa21.61■■□□□ 1.05
PDLIM2-208ENST00000416159 PICALMQ13492 652 aa21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 SH3BP5LQ7L8J4 393 aa21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 DBNDD2Q9BQY9 259 aa21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 PTPN22Q9Y2R2 807 aa21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 ATRNL1Q5VV63 1379 aa21.6■■□□□ 1.05
PDLIM2-208ENST00000416159 DDTLA6NHG4 134 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-208ENST00000416159 PHF20L1A8MW92 1017 aa21.59■■□□□ 1.05
PDLIM2-208ENST00000416159 TLR2O60603 784 aa21.59■■□□□ 1.05
PDLIM2-208ENST00000416159 ANKRD23Q86SG2 305 aa21.59■■□□□ 1.05
PDLIM2-208ENST00000416159 ZNF512BQ96KM6 892 aaPredicted RBP21.59■■□□□ 1.05
PDLIM2-208ENST00000416159 DOCK2Q92608 1830 aa21.58■■□□□ 1.05
PDLIM2-208ENST00000416159 CXCL11O14625 94 aa21.58■■□□□ 1.05
PDLIM2-208ENST00000416159 SCYL3Q8IZE3 742 aa21.58■■□□□ 1.05
PDLIM2-208ENST00000416159 PANK1Q8TE04 598 aa21.58■■□□□ 1.05
PDLIM2-208ENST00000416159 IGSF3O75054 1194 aa21.57■■□□□ 1.04
PDLIM2-208ENST00000416159 CEP85Q6P2H3 762 aa21.57■■□□□ 1.04
PDLIM2-208ENST00000416159 NOL10Q9BSC4 688 aaKnown RBP21.57■■□□□ 1.04
PDLIM2-208ENST00000416159 PICK1Q9NRD5 415 aa21.57■■□□□ 1.04
PDLIM2-208ENST00000416159 SNRKQ9NRH2 765 aa21.57■■□□□ 1.04
PDLIM2-208ENST00000416159 TBC1D12O60347 775 aa21.56■■□□□ 1.04
PDLIM2-208ENST00000416159 CTNND1O60716 968 aaKnown RBP21.56■■□□□ 1.04
PDLIM2-208ENST00000416159 KIF22Q14807 665 aa21.56■■□□□ 1.04
PDLIM2-208ENST00000416159 PDHXO00330 501 aa21.55■■□□□ 1.04
PDLIM2-208ENST00000416159 BAG3O95817 575 aa21.55■■□□□ 1.04
PDLIM2-208ENST00000416159 CAP1Q01518 475 aa21.55■■□□□ 1.04
PDLIM2-208ENST00000416159 NAA16Q6N069 864 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-208ENST00000416159 ZHX2Q9Y6X8 837 aa21.55■■□□□ 1.04
PDLIM2-208ENST00000416159 PTPRAP18433 802 aa21.54■■□□□ 1.04
PDLIM2-208ENST00000416159 ERC1Q8IUD2 1116 aa21.54■■□□□ 1.04
PDLIM2-208ENST00000416159 TEX11Q8IYF3 940 aa21.54■■□□□ 1.04
PDLIM2-208ENST00000416159 CCDC8Q9H0W5 538 aaPredicted RBP21.54■■□□□ 1.04
PDLIM2-208ENST00000416159 DBNLQ9UJU6 430 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-208ENST00000416159 CYP2E1P05181 493 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 PLCG2P16885 1265 aa21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 MOGSQ13724 837 aa21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 C17orf99Q6UX52 265 aa21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 FASTKD5Q7L8L6 764 aaKnown RBP21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 EAF2Q96CJ1 260 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 OSBPL5Q9H0X9 879 aaPredicted RBP21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.53■■□□□ 1.04
PDLIM2-208ENST00000416159 COL2A1P02458 1487 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 GNRH1P01148 92 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 ZAP70P43403 619 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 PPP4CP60510 307 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 LACTBP83111 547 aaPredicted RBP21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 HSP90AB4PQ58FF6 505 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 ARMC5Q96C12 935 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 AFG3L2Q9Y4W6 797 aa21.52■■□□□ 1.04
PDLIM2-208ENST00000416159 A0A0G2JLL6 359 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 SLURP2P0DP57 97 aa21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 PRRT2Q7Z6L0 340 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 SH3RF3Q8TEJ3 882 aaPredicted RBP21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 AATFQ9NY61 560 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 TLR7Q9NYK1 1049 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 DDX19BQ9UMR2 479 aa21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
PDLIM2-208ENST00000416159 PDE4DIPQ5VU43 2346 aa21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 GPAT2Q6NUI2 795 aa21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 RPAP2Q8IXW5 612 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 PARK7Q99497 189 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 DHX36Q9H2U1 1008 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 CHMP4BQ9H444 224 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 PIH1D3Q9NQM4 214 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 CPA4Q9UI42 421 aa21.5■■□□□ 1.03
PDLIM2-208ENST00000416159 PRMT2P55345 433 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 NBPF11Q86T75 865 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 ARHGAP39Q9C0H5 1083 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 HERC5Q9UII4 1024 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 PTCH2Q9Y6C5 1203 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 DOCK1Q14185 1865 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 ADGRA2Q96PE1 1338 aa21.49■■□□□ 1.03
PDLIM2-208ENST00000416159 HMMRO75330 724 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 GADL1Q6ZQY3 521 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 AACSQ86V21 672 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 PI4KBQ9UBF8 816 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 RCAN3Q9UKA8 241 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 SLC45A1Q9Y2W3 748 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 MAST2Q6P0Q8 1798 aa21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 KIAA0100Q14667 2235 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-208ENST00000416159 FAM196BA6NMK8 535 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 HOXD10P28358 340 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 SLC9C1Q4G0N8 1177 aa21.47■■□□□ 1.03
PDLIM2-208ENST00000416159 ADGRA1Q86SQ6 560 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms