RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 IL22RA1Q8N6P7 574 aa4.79□□□□□ -1.64
APP-207ENST00000415997 TRPM4Q8TD43 1214 aa4.79□□□□□ -1.64
APP-207ENST00000415997 GLMNQ92990 594 aa4.79□□□□□ -1.64
APP-207ENST00000415997 NSUN5Q96P11 429 aaKnown RBP4.79□□□□□ -1.64
APP-207ENST00000415997 KRTAP4-12Q9BQ66 201 aa4.79□□□□□ -1.64
APP-207ENST00000415997 LMO7Q8WWI1 1683 aa4.79□□□□□ -1.64
APP-207ENST00000415997 KIAA0232Q92628 1395 aa4.78□□□□□ -1.64
APP-207ENST00000415997 PNPLA7Q6ZV29 1317 aa4.78□□□□□ -1.64
APP-207ENST00000415997 GHRHP01286 108 aa4.78□□□□□ -1.64
APP-207ENST00000415997 GLB1P16278 677 aa4.78□□□□□ -1.64
APP-207ENST00000415997 IGFBP4P22692 258 aa4.78□□□□□ -1.64
APP-207ENST00000415997 GPLD1P80108 840 aa4.78□□□□□ -1.64
APP-207ENST00000415997 FLIIQ13045 1269 aa4.78□□□□□ -1.64
APP-207ENST00000415997 AGGF1Q8N302 714 aaeCLIP4.78□□□□□ -1.64
APP-207ENST00000415997 PLD4Q96BZ4 506 aa4.78□□□□□ -1.64
APP-207ENST00000415997 PRDM11Q9NQV5 511 aa4.78□□□□□ -1.64
APP-207ENST00000415997 RTCBQ9Y3I0 505 aaKnown RBP4.78□□□□□ -1.64
APP-207ENST00000415997 CD2APQ9Y5K6 639 aa4.78□□□□□ -1.64
APP-207ENST00000415997 MAFBQ9Y5Q3 323 aaPredicted RBP4.78□□□□□ -1.64
APP-207ENST00000415997 DAPK1P53355 1430 aa4.78□□□□□ -1.64
APP-207ENST00000415997 BRD4O60885 1362 aaPredicted RBP4.78□□□□□ -1.64
APP-207ENST00000415997 CLTCL1P53675 1640 aa4.77□□□□□ -1.65
APP-207ENST00000415997 LOC102724428A0A0B4J2F2 783 aa4.77□□□□□ -1.65
APP-207ENST00000415997 DLL1O00548 723 aa4.77□□□□□ -1.65
APP-207ENST00000415997 PTCD1O75127 700 aaKnown RBP4.77□□□□□ -1.65
APP-207ENST00000415997 XYLBO75191 536 aa4.77□□□□□ -1.65
APP-207ENST00000415997 PSAPP07602 524 aa4.77□□□□□ -1.65
APP-207ENST00000415997 CDC25BP30305 580 aa4.77□□□□□ -1.65
APP-207ENST00000415997 SIK1P57059 783 aa4.77□□□□□ -1.65
APP-207ENST00000415997 PTK7Q13308 1070 aa4.77□□□□□ -1.65
APP-207ENST00000415997 C11orf91Q3C1V1 193 aa4.77□□□□□ -1.65
APP-207ENST00000415997 MCTP1Q6DN14 999 aa4.77□□□□□ -1.65
APP-207ENST00000415997 ANKMY2Q8IV38 441 aa4.77□□□□□ -1.65
APP-207ENST00000415997 MARCH10Q8NA82 808 aaPredicted RBP4.77□□□□□ -1.65
APP-207ENST00000415997 CLUAP1Q96AJ1 413 aa4.77□□□□□ -1.65
APP-207ENST00000415997 MRPL18Q9H0U6 180 aaKnown RBP4.77□□□□□ -1.65
APP-207ENST00000415997 GOLGA2P5Q9HBQ8 144 aa4.77□□□□□ -1.65
APP-207ENST00000415997 TLR7Q9NYK1 1049 aaKnown RBP4.77□□□□□ -1.65
APP-207ENST00000415997 USP35Q9P2H5 1018 aa4.77□□□□□ -1.65
APP-207ENST00000415997 ANKRD30AQ9BXX3 1397 aa4.77□□□□□ -1.65
APP-207ENST00000415997 PLEKHH1Q9ULM0 1364 aa4.77□□□□□ -1.65
APP-207ENST00000415997 BTBD11A6QL63 1104 aa4.76□□□□□ -1.65
APP-207ENST00000415997 F8W735 103 aaPredicted RBP4.76□□□□□ -1.65
APP-207ENST00000415997 OPLAHO14841 1288 aa4.76□□□□□ -1.65
APP-207ENST00000415997 PRKCSHP14314 528 aaPredicted RBP4.76□□□□□ -1.65
APP-207ENST00000415997 LMOD1P29536 600 aaPredicted RBP4.76□□□□□ -1.65
APP-207ENST00000415997 NRLP54845 237 aa4.76□□□□□ -1.65
APP-207ENST00000415997 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
APP-207ENST00000415997 PMFBP1Q8TBY8 1022 aa4.76□□□□□ -1.65
APP-207ENST00000415997 TTC9Q92623 222 aa4.76□□□□□ -1.65
APP-207ENST00000415997 CALR3Q96L12 384 aaKnown RBP4.76□□□□□ -1.65
APP-207ENST00000415997 RBSNQ9H1K0 784 aa4.76□□□□□ -1.65
APP-207ENST00000415997 VRTNQ9H8Y1 702 aa4.76□□□□□ -1.65
APP-207ENST00000415997 RGPD8O14715 1765 aaPredicted RBP4.76□□□□□ -1.65
APP-207ENST00000415997 SZT2Q5T011 3432 aa4.75□□□□□ -1.65
APP-207ENST00000415997 ANKRD50Q9ULJ7 1429 aa4.75□□□□□ -1.65
APP-207ENST00000415997 TUBGCP6Q96RT7 1819 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L15C9J2P7 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L10C9JJH3 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L13C9JLJ4 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L12C9JPN9 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L11C9JVI0 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L21D6R901 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L18D6R9N7 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L22D6RA61 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L17D6RBQ6 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L19D6RCP7 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L20D6RJB6 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 PAX4O43316 350 aa4.75□□□□□ -1.65
APP-207ENST00000415997 MMP20O60882 483 aa4.75□□□□□ -1.65
APP-207ENST00000415997 CTCFP49711 727 aaPredicted RBP4.75□□□□□ -1.65
APP-207ENST00000415997 IRAK1P51617 712 aa4.75□□□□□ -1.65
APP-207ENST00000415997 USP17L24Q0WX57 530 aa4.75□□□□□ -1.65
APP-207ENST00000415997 CDCA8Q53HL2 280 aa4.75□□□□□ -1.65
APP-207ENST00000415997 WAPLQ7Z5K2 1190 aa4.75□□□□□ -1.65
APP-207ENST00000415997 TREML1Q86YW5 311 aa4.75□□□□□ -1.65
APP-207ENST00000415997 DZIP1LQ8IYY4 767 aaKnown RBP4.75□□□□□ -1.65
APP-207ENST00000415997 SMC1BQ8NDV3 1235 aa4.75□□□□□ -1.65
APP-207ENST00000415997 PPP1R12CQ9BZL4 782 aa4.75□□□□□ -1.65
APP-207ENST00000415997 STOML1Q9UBI4 398 aa4.75□□□□□ -1.65
APP-207ENST00000415997 TRIM33Q9UPN9 1127 aa4.75□□□□□ -1.65
APP-207ENST00000415997 CPDO75976 1380 aa4.75□□□□□ -1.65
APP-207ENST00000415997 ABCC11Q96J66 1382 aa4.75□□□□□ -1.65
APP-207ENST00000415997 COL5A2P05997 1499 aaPredicted RBP4.75□□□□□ -1.65
APP-207ENST00000415997 NHSQ6T4R5 1651 aa4.74□□□□□ -1.65
APP-207ENST00000415997 QRICH2Q9H0J4 1663 aa4.74□□□□□ -1.65
APP-207ENST00000415997 ANKARQ7Z5J8 1434 aa4.74□□□□□ -1.65
APP-207ENST00000415997 LINC01387J3KSC0 135 aa4.74□□□□□ -1.65
APP-207ENST00000415997 SETDB1Q15047 1291 aa4.74□□□□□ -1.65
APP-207ENST00000415997 KANK4Q5T7N3 995 aaPredicted RBP4.74□□□□□ -1.65
APP-207ENST00000415997 TXNDC11Q6PKC3 985 aa4.74□□□□□ -1.65
APP-207ENST00000415997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.74□□□□□ -1.65
APP-207ENST00000415997 RAXQ9Y2V3 346 aa4.74□□□□□ -1.65
APP-207ENST00000415997 KNDC1Q76NI1 1749 aa4.74□□□□□ -1.65
APP-207ENST00000415997 IFT172Q9UG01 1749 aa4.74□□□□□ -1.65
APP-207ENST00000415997 ACIN1Q9UKV3 1341 aaKnown RBP4.73□□□□□ -1.65
APP-207ENST00000415997 CRB1P82279 1406 aa4.73□□□□□ -1.65
APP-207ENST00000415997 TRPM1Q7Z4N2 1603 aa4.73□□□□□ -1.65
APP-207ENST00000415997 CCDC85CA6NKD9 419 aa4.73□□□□□ -1.65
APP-207ENST00000415997 MED26O95402 600 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms