RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 FLT1P17948 1338 aa15.89■□□□□ 0.13
CNN3-203ENST00000415017 IQCA1LA6NCM1 817 aa15.88■□□□□ 0.13
CNN3-203ENST00000415017 RBM25P49756 843 aaKnown RBP15.88■□□□□ 0.13
CNN3-203ENST00000415017 RBM5P52756 815 aaKnown RBP eCLIP15.88■□□□□ 0.13
CNN3-203ENST00000415017 TBC1D10BQ4KMP7 808 aaPredicted RBP15.88■□□□□ 0.13
CNN3-203ENST00000415017 TAF1DQ9H5J8 278 aaPredicted RBP15.88■□□□□ 0.13
CNN3-203ENST00000415017 ANAPC4Q9UJX5 808 aa15.88■□□□□ 0.13
CNN3-203ENST00000415017 RBM8AQ9Y5S9 174 aaKnown RBP15.88■□□□□ 0.13
CNN3-203ENST00000415017 PITPNM2Q9BZ72 1349 aa15.88■□□□□ 0.13
CNN3-203ENST00000415017 FGRP09769 529 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 LMOD1P29536 600 aaPredicted RBP15.87■□□□□ 0.13
CNN3-203ENST00000415017 CTR9Q6PD62 1173 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 ZC3H15Q8WU90 426 aaKnown RBP15.87■□□□□ 0.13
CNN3-203ENST00000415017 TGFBRAP1Q8WUH2 860 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 OSBPL5Q9H0X9 879 aaPredicted RBP15.87■□□□□ 0.13
CNN3-203ENST00000415017 TAOK2Q9UL54 1235 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 ROBO3Q96MS0 1386 aa15.87■□□□□ 0.13
CNN3-203ENST00000415017 EPHX2P34913 555 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 C12orf60Q5U649 245 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 SH3BP5LQ7L8J4 393 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 METTL16Q86W50 562 aaKnown RBP15.86■□□□□ 0.13
CNN3-203ENST00000415017 FAM151AQ8WW52 585 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 NACAP1Q9BZK3 213 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 CTNNA3Q9UI47 895 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 ASTN2O75129 1339 aaPredicted RBP15.86■□□□□ 0.13
CNN3-203ENST00000415017 MYH8P13535 1937 aa15.86■□□□□ 0.13
CNN3-203ENST00000415017 MYO1BO43795 1136 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 CYP21A2P08686 494 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 CACNB3P54284 484 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 MAP3K10Q02779 954 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 CREB3L3Q68CJ9 461 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 MAPKAPK5Q8IW41 473 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 ZFPM1Q8IX07 1006 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 TBC1D32Q96NH3 1257 aa15.85■□□□□ 0.13
CNN3-203ENST00000415017 ARPP21Q9UBL0 812 aaPredicted RBP15.85■□□□□ 0.13
CNN3-203ENST00000415017 USP17L12C9JPN9 530 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 USP17L21D6R901 530 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 SLC27A2O14975 620 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 USP5P45974 858 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 ANAPC15P60006 121 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
CNN3-203ENST00000415017 PNMA8AQ86V59 439 aaPredicted RBP15.84■□□□□ 0.13
CNN3-203ENST00000415017 RASEFQ8IZ41 740 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 TEPSINQ96N21 525 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 KIF2CQ99661 725 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 NAPBQ9H115 298 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 DHX36Q9H2U1 1008 aaKnown RBP15.84■□□□□ 0.13
CNN3-203ENST00000415017 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 TACC3Q9Y6A5 838 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 TAF6LQ9Y6J9 622 aa15.84■□□□□ 0.13
CNN3-203ENST00000415017 GREB1LQ9C091 1923 aaPredicted RBP15.84■□□□□ 0.13
CNN3-203ENST00000415017 PAPPA2Q9BXP8 1791 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 CLRN2A0PK11 232 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 APPP05067 770 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 VEGFAP15692 232 aaPredicted RBP15.83■□□□□ 0.12
CNN3-203ENST00000415017 GABPAQ06546 454 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 C22orf23Q9BZE7 217 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 EHD4Q9H223 541 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 MCM9Q9NXL9 1143 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 TMOD2Q9NZR1 351 aa15.83■□□□□ 0.12
CNN3-203ENST00000415017 DDTLA6NHG4 134 aaPredicted RBP15.82■□□□□ 0.12
CNN3-203ENST00000415017 SMIM22K7EJ46 135 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 TDO2P48775 406 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 PLCD1P51178 756 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 EVX2Q03828 476 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 PPARAQ07869 468 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 TNFAIP1Q13829 316 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 ANGEL2Q5VTE6 544 aaKnown RBP15.82■□□□□ 0.12
CNN3-203ENST00000415017 APOBEC3FQ8IUX4 373 aaKnown RBP15.82■□□□□ 0.12
CNN3-203ENST00000415017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
CNN3-203ENST00000415017 PPP2R3BQ9Y5P8 575 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 SNX14Q9Y5W7 946 aa15.82■□□□□ 0.12
CNN3-203ENST00000415017 CYP2D7A0A087X1C5 515 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 TCP10L2B9ZVM9 353 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 ZNF213O14771 459 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 CYP2D6P10635 497 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 PCP11498 1178 aaKnown RBP15.81■□□□□ 0.12
CNN3-203ENST00000415017 PICALMQ13492 652 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 IMMTQ16891 758 aaKnown RBP15.81■□□□□ 0.12
CNN3-203ENST00000415017 STOX1Q6ZVD7 989 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 STAG1Q8WVM7 1258 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 DDRGK1Q96HY6 314 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 GGA3Q9NZ52 723 aa15.81■□□□□ 0.12
CNN3-203ENST00000415017 TBC1D12O60347 775 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 TNNI2P48788 182 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 NT5C2P49902 561 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 RASA3Q14644 834 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 C16orf86Q6ZW13 317 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 TTC6Q86TZ1 520 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 TBC1D10CQ8IV04 446 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 FOXP4Q8IVH2 680 aaPredicted RBP15.8■□□□□ 0.12
CNN3-203ENST00000415017 TM6SF1Q9BZW5 370 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 DEFB129Q9H1M3 183 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 PI4KBQ9UBF8 816 aa15.8■□□□□ 0.12
CNN3-203ENST00000415017 E7EWF7 191 aa15.79■□□□□ 0.12
CNN3-203ENST00000415017 ORC4O43929 436 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms