RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SEMA6BQ9H3T3 888 aa16.96■□□□□ 0.31
RAPGEF1-204ENST00000414781 DDX60LQ5H9U9 1706 aaKnown RBP16.96■□□□□ 0.3
RAPGEF1-204ENST00000414781 COL6A1P12109 1028 aa16.95■□□□□ 0.3
RAPGEF1-204ENST00000414781 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF1-204ENST00000414781 FAM110CQ1W6H9 321 aa16.95■□□□□ 0.3
RAPGEF1-204ENST00000414781 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF1-204ENST00000414781 FAM151AQ8WW52 585 aa16.95■□□□□ 0.3
RAPGEF1-204ENST00000414781 FOSL2P15408 326 aa16.94■□□□□ 0.3
RAPGEF1-204ENST00000414781 GYG1P46976 350 aa16.94■□□□□ 0.3
RAPGEF1-204ENST00000414781 APOBEC3HQ6NTF7 200 aaKnown RBP16.94■□□□□ 0.3
RAPGEF1-204ENST00000414781 FAM84BQ96KN1 310 aaPredicted RBP16.94■□□□□ 0.3
RAPGEF1-204ENST00000414781 PLIN1O60240 522 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 C8orf58Q8NAV2 365 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 STK31Q9BXU1 1019 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 PICK1Q9NRD5 415 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 RAPGEFL1Q9UHV5 662 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 RCAN3Q9UKA8 241 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 PNMA3Q9UL41 463 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 SUGT1Q9Y2Z0 365 aa16.93■□□□□ 0.3
RAPGEF1-204ENST00000414781 MUC3AQ02505 3323 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 TMEM265A0A087WTH1 108 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 VAMP4O75379 141 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 HHIPL2Q6UWX4 724 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 VPS37DQ86XT2 251 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 MYLIPQ8WY64 445 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 ZHX2Q9Y6X8 837 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 EYSQ5T1H1 3165 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
RAPGEF1-204ENST00000414781 PRUNE2Q8WUY3 3088 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 GRIK5Q16478 980 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 LRRC26Q2I0M4 334 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 CCDC57Q2TAC2 916 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 SCYL3Q8IZE3 742 aa16.91■□□□□ 0.3
RAPGEF1-204ENST00000414781 GCLCP48506 637 aaPredicted RBP16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 SMAD3P84022 425 aaKnown RBP16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 CHAF1AQ13111 956 aaPredicted RBP16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 LINS1Q8NG48 757 aa16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 PRKAG2Q9UGJ0 569 aa16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 AGTPBP1Q9UPW5 1226 aa16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 AFG3L2Q9Y4W6 797 aa16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 LAMA2P24043 3122 aaKnown RBP16.9■□□□□ 0.3
RAPGEF1-204ENST00000414781 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 PTPRAP18433 802 aa16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 TRIM32Q13049 653 aa16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 TRMT44Q8IYL2 757 aaKnown RBP16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 GJD2Q9UKL4 321 aa16.89■□□□□ 0.29
RAPGEF1-204ENST00000414781 FOXO4P98177 505 aa16.88■□□□□ 0.29
RAPGEF1-204ENST00000414781 FBXO33Q7Z6M2 555 aa16.88■□□□□ 0.29
RAPGEF1-204ENST00000414781 TRIB2Q92519 343 aa16.88■□□□□ 0.29
RAPGEF1-204ENST00000414781 RARSP54136 660 aaKnown RBP16.87■□□□□ 0.29
RAPGEF1-204ENST00000414781 MAP3K12Q12852 859 aa16.87■□□□□ 0.29
RAPGEF1-204ENST00000414781 CAVIN4Q5BKX8 364 aa16.87■□□□□ 0.29
RAPGEF1-204ENST00000414781 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF1-204ENST00000414781 ARIH1Q9Y4X5 557 aaPredicted RBP16.87■□□□□ 0.29
RAPGEF1-204ENST00000414781 XRCC5P13010 732 aaKnown RBP16.86■□□□□ 0.29
RAPGEF1-204ENST00000414781 TCP10Q12799 353 aa16.86■□□□□ 0.29
RAPGEF1-204ENST00000414781 LMBR1LQ6UX01 489 aa16.86■□□□□ 0.29
RAPGEF1-204ENST00000414781 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 PABPC4Q13310 644 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 PROCA1Q8NCQ7 364 aaPredicted RBP16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 DNAAF4Q8WXU2 420 aa16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 ZNF594Q96JF6 807 aaPredicted RBP16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 IQSEC3Q9UPP2 1182 aaPredicted RBP16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 SYNGAP1Q96PV0 1343 aa16.85■□□□□ 0.29
RAPGEF1-204ENST00000414781 TRIM75PA6NK02 468 aa16.84■□□□□ 0.29
RAPGEF1-204ENST00000414781 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
RAPGEF1-204ENST00000414781 LRRFIP2Q9Y608 721 aaKnown RBP16.84■□□□□ 0.29
RAPGEF1-204ENST00000414781 ATRNL1Q5VV63 1379 aa16.84■□□□□ 0.29
RAPGEF1-204ENST00000414781 ZKSCAN1P17029 563 aaPredicted RBP16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 SHHQ15465 462 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 LHX8Q68G74 356 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 CDC42EP5Q6NZY7 148 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 MROH5Q6ZUA9 1318 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 ATXN2LQ8WWM7 1075 aaKnown RBP16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 SSH1Q8WYL5 1049 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 PIEZO1Q92508 2521 aa16.83■□□□□ 0.28
RAPGEF1-204ENST00000414781 NCOR1O75376 2440 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 KIF16BQ96L93 1317 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 CTNND1O60716 968 aaKnown RBP16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 MS4A1P11836 297 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 CYP2B6P20813 491 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 NFIAQ12857 509 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 FLIIQ13045 1269 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 G2E3Q7L622 706 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 NUDT12Q9BQG2 462 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
RAPGEF1-204ENST00000414781 BDP1A6H8Y1 2624 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms