RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 DDX4Q9NQI0 724 aaKnown RBP30.68■■■□□ 2.5
CPNE1-207ENST00000414664 WBP1LQ9NX94 342 aa30.68■■■□□ 2.5
CPNE1-207ENST00000414664 ERC2O15083 957 aa30.67■■■□□ 2.5
CPNE1-207ENST00000414664 MAP3K9P80192 1104 aa30.67■■■□□ 2.5
CPNE1-207ENST00000414664 SMC5Q8IY18 1101 aa30.67■■■□□ 2.5
CPNE1-207ENST00000414664 EDC3Q96F86 508 aaKnown RBP30.67■■■□□ 2.5
CPNE1-207ENST00000414664 ZNF341Q9BYN7 854 aa30.67■■■□□ 2.5
CPNE1-207ENST00000414664 KIF23Q02241 960 aaPredicted RBP30.66■■■□□ 2.5
CPNE1-207ENST00000414664 CSRNP1Q96S65 589 aa30.66■■■□□ 2.5
CPNE1-207ENST00000414664 PDE6AP16499 860 aa30.65■■■□□ 2.5
CPNE1-207ENST00000414664 MIGA2Q7L4E1 593 aa30.65■■■□□ 2.5
CPNE1-207ENST00000414664 DDX55Q8NHQ9 600 aaKnown RBP eCLIP30.65■■■□□ 2.58e-6■■□□□ 11.7
CPNE1-207ENST00000414664 CSADQ9Y600 493 aa30.65■■■□□ 2.5
CPNE1-207ENST00000414664 IGHDP01880 384 aa30.64■■■□□ 2.5
CPNE1-207ENST00000414664 MX1P20591 662 aa30.64■■■□□ 2.5
CPNE1-207ENST00000414664 ZSCAN25Q6NSZ9 544 aa30.64■■■□□ 2.5
CPNE1-207ENST00000414664 MIGA1Q8NAN2 632 aa30.64■■■□□ 2.5
CPNE1-207ENST00000414664 CLMNQ96JQ2 1002 aa30.64■■■□□ 2.5
CPNE1-207ENST00000414664 OSBPL5Q9H0X9 879 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-207ENST00000414664 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.64■■■□□ 2.5
CPNE1-207ENST00000414664 WRNIP1Q96S55 665 aa30.63■■■□□ 2.49
CPNE1-207ENST00000414664 ZIC5Q96T25 663 aa30.63■■■□□ 2.49
CPNE1-207ENST00000414664 DDTLA6NHG4 134 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-207ENST00000414664 GLRX3O76003 335 aaKnown RBP30.62■■■□□ 2.49
CPNE1-207ENST00000414664 DYNLL1P63167 89 aaKnown RBP30.62■■■□□ 2.49
CPNE1-207ENST00000414664 SPRYD7Q5W111 196 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 TSHZ3Q63HK5 1081 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 PPP1R3FQ6ZSY5 799 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-207ENST00000414664 SH3BP5LQ7L8J4 393 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 TGFBRAP1Q8WUH2 860 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 ZNF532Q9HCE3 1301 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 ATRNL1Q5VV63 1379 aa30.62■■■□□ 2.49
CPNE1-207ENST00000414664 COL2A1P02458 1487 aaPredicted RBP30.62■■■□□ 2.49
CPNE1-207ENST00000414664 MAGEB6P1A0A0J9YX57 407 aa30.61■■■□□ 2.49
CPNE1-207ENST00000414664 ZBTB48P10074 688 aaPredicted RBP30.61■■■□□ 2.49
CPNE1-207ENST00000414664 CA12O43570 354 aa30.6■■■□□ 2.49
CPNE1-207ENST00000414664 ADD2P35612 726 aa30.6■■■□□ 2.49
CPNE1-207ENST00000414664 B4GALNT3Q6L9W6 998 aa30.6■■■□□ 2.49
CPNE1-207ENST00000414664 OTUD7AQ8TE49 926 aaPredicted RBP30.6■■■□□ 2.49
CPNE1-207ENST00000414664 DHX36Q9H2U1 1008 aaKnown RBP30.6■■■□□ 2.49
CPNE1-207ENST00000414664 ELP3Q9H9T3 547 aa30.6■■■□□ 2.49
CPNE1-207ENST00000414664 TCRBV5S4A2TA0A5A2 114 aa30.59■■■□□ 2.49
CPNE1-207ENST00000414664 MKRN3Q13064 507 aaKnown RBP30.59■■■□□ 2.49
CPNE1-207ENST00000414664 VGLL4Q14135 290 aa30.59■■■□□ 2.49
CPNE1-207ENST00000414664 MAPKAPK5Q8IW41 473 aa30.59■■■□□ 2.49
CPNE1-207ENST00000414664 WNK4Q96J92 1243 aa30.59■■■□□ 2.49
CPNE1-207ENST00000414664 ZNF112Q9UJU3 913 aa30.59■■■□□ 2.49
CPNE1-207ENST00000414664 USP5P45974 858 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 MAP3K10Q02779 954 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 UBE3CQ15386 1083 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 KBTBD3Q8NAB2 608 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 PI4K2BQ8TCG2 481 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 LNPKQ9C0E8 428 aa30.58■■■□□ 2.49
CPNE1-207ENST00000414664 PCNTO95613 3336 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 FLT1P17948 1338 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 SALL3Q9BXA9 1300 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 SREBF2Q12772 1141 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 LRRFIP1Q32MZ4 808 aaKnown RBP30.57■■■□□ 2.48
CPNE1-207ENST00000414664 RIOK1Q9BRS2 568 aaKnown RBP30.57■■■□□ 2.48
CPNE1-207ENST00000414664 STAP2Q9UGK3 403 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 OTOFQ9HC10 1997 aa30.57■■■□□ 2.48
CPNE1-207ENST00000414664 FOXN1O15353 648 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 TBC1D12O60347 775 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 CTCFP49711 727 aaPredicted RBP30.56■■■□□ 2.48
CPNE1-207ENST00000414664 NUCB1Q02818 461 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 CHD1LQ86WJ1 897 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 ZKSCAN4Q969J2 545 aaPredicted RBP30.56■■■□□ 2.48
CPNE1-207ENST00000414664 OPTNQ96CV9 577 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 PI4KBQ9UBF8 816 aa30.56■■■□□ 2.48
CPNE1-207ENST00000414664 MANSC4A6NHS7 340 aaPredicted RBP30.55■■■□□ 2.48
CPNE1-207ENST00000414664 INHBEP58166 350 aa30.55■■■□□ 2.48
CPNE1-207ENST00000414664 CRNKL1Q9BZJ0 848 aaKnown RBP30.55■■■□□ 2.48
CPNE1-207ENST00000414664 INPP5BP32019 993 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 TM4SF4P48230 202 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 PDE1AP54750 535 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 ERO1BQ86YB8 467 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.54■■■□□ 2.489e-8■■■■■ 116.8
CPNE1-207ENST00000414664 SNCAIPQ9Y6H5 919 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 FOCADQ5VW36 1801 aa30.54■■■□□ 2.48
CPNE1-207ENST00000414664 CDK5RAP2Q96SN8 1893 aa30.53■■■□□ 2.48
CPNE1-207ENST00000414664 SPDYE5A6NIY4 337 aa30.53■■■□□ 2.48
CPNE1-207ENST00000414664 ZFYP08048 801 aaPredicted RBP30.53■■■□□ 2.48
CPNE1-207ENST00000414664 HERC5Q9UII4 1024 aaKnown RBP30.53■■■□□ 2.48
CPNE1-207ENST00000414664 MYH7P12883 1935 aa30.53■■■□□ 2.48
CPNE1-207ENST00000414664 HLA-DOAP06340 250 aa30.52■■■□□ 2.48
CPNE1-207ENST00000414664 NOL9Q5SY16 702 aaKnown RBP30.52■■■□□ 2.48
CPNE1-207ENST00000414664 FOXP4Q8IVH2 680 aaPredicted RBP30.52■■■□□ 2.48
CPNE1-207ENST00000414664 PHF20L1A8MW92 1017 aa30.51■■■□□ 2.47
CPNE1-207ENST00000414664 OTUD5Q96G74 571 aa30.51■■■□□ 2.47
CPNE1-207ENST00000414664 SAGE1Q9NXZ1 904 aa30.51■■■□□ 2.47
CPNE1-207ENST00000414664 PALD1Q9ULE6 856 aa30.51■■■□□ 2.47
CPNE1-207ENST00000414664 GJA5P36382 358 aa30.5■■■□□ 2.47
CPNE1-207ENST00000414664 LCORLQ8N3X6 602 aa30.5■■■□□ 2.47
CPNE1-207ENST00000414664 TRIM34Q9BYJ4 488 aa30.5■■■□□ 2.47
CPNE1-207ENST00000414664 SAP30BPQ9UHR5 308 aaKnown RBP30.5■■■□□ 2.47
CPNE1-207ENST00000414664 RNF113AO15541 343 aaKnown RBP30.49■■■□□ 2.47
CPNE1-207ENST00000414664 CTNND1O60716 968 aaKnown RBP30.49■■■□□ 2.47
CPNE1-207ENST00000414664 MBD4O95243 580 aa30.49■■■□□ 2.47
CPNE1-207ENST00000414664 PPATQ06203 517 aa30.49■■■□□ 2.47
CPNE1-207ENST00000414664 SLFNL1Q499Z3 407 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms