RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 FLT1P17948 1338 aa18.35■□□□□ 0.53
LINC00116-201ENST00000414416 CDK5RAP2Q96SN8 1893 aa18.35■□□□□ 0.53
LINC00116-201ENST00000414416 TDO2P48775 406 aa18.34■□□□□ 0.53
LINC00116-201ENST00000414416 NAPBQ9H115 298 aa18.34■□□□□ 0.53
LINC00116-201ENST00000414416 DDX4Q9NQI0 724 aaKnown RBP18.34■□□□□ 0.53
LINC00116-201ENST00000414416 ASTN2O75129 1339 aaPredicted RBP18.34■□□□□ 0.53
LINC00116-201ENST00000414416 TCP10L2B9ZVM9 353 aa18.34■□□□□ 0.53
LINC00116-201ENST00000414416 FGAP02671 866 aa18.34■□□□□ 0.53
LINC00116-201ENST00000414416 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
LINC00116-201ENST00000414416 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
LINC00116-201ENST00000414416 FOCADQ5VW36 1801 aa18.33■□□□□ 0.53
LINC00116-201ENST00000414416 EPB41L2O43491 1005 aaKnown RBP18.33■□□□□ 0.52
LINC00116-201ENST00000414416 TCP10Q12799 353 aa18.33■□□□□ 0.52
LINC00116-201ENST00000414416 ALX1Q15699 326 aa18.33■□□□□ 0.52
LINC00116-201ENST00000414416 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
LINC00116-201ENST00000414416 ANGEL2Q5VTE6 544 aaKnown RBP18.33■□□□□ 0.52
LINC00116-201ENST00000414416 FKBP1CQ5VVH2 108 aa18.33■□□□□ 0.52
LINC00116-201ENST00000414416 GGA3Q9NZ52 723 aa18.33■□□□□ 0.52
LINC00116-201ENST00000414416 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
LINC00116-201ENST00000414416 U3KPZ7 1027 aaPredicted RBP18.33■□□□□ 0.52
LINC00116-201ENST00000414416 ZMYM6O95789 1325 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 NPM3O75607 178 aaKnown RBP18.32■□□□□ 0.52
LINC00116-201ENST00000414416 RBM25P49756 843 aaKnown RBP18.32■□□□□ 0.52
LINC00116-201ENST00000414416 TNFAIP1Q13829 316 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 OSBPL5Q9H0X9 879 aaPredicted RBP18.32■□□□□ 0.52
LINC00116-201ENST00000414416 MCM9Q9NXL9 1143 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 RBM8AQ9Y5S9 174 aaKnown RBP18.32■□□□□ 0.52
LINC00116-201ENST00000414416 ENTPD3O75355 529 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
LINC00116-201ENST00000414416 NAV1Q8NEY1 1877 aa18.31■□□□□ 0.52
LINC00116-201ENST00000414416 TNNI2P48788 182 aa18.31■□□□□ 0.52
LINC00116-201ENST00000414416 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
LINC00116-201ENST00000414416 SAP30BPQ9UHR5 308 aaKnown RBP18.31■□□□□ 0.52
LINC00116-201ENST00000414416 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
LINC00116-201ENST00000414416 USP17L12C9JPN9 530 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 USP17L21D6R901 530 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 FAM83AQ86UY5 434 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
LINC00116-201ENST00000414416 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
LINC00116-201ENST00000414416 PITPNM2Q9BZ72 1349 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 ZFPM1Q8IX07 1006 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 FAM151AQ8WW52 585 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 DCPSQ96C86 337 aaKnown RBP18.3■□□□□ 0.52
LINC00116-201ENST00000414416 KIF2CQ99661 725 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 PALD1Q9ULE6 856 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 SCAF8Q9UPN6 1271 aaKnown RBP18.3■□□□□ 0.52
LINC00116-201ENST00000414416 CNTNAP1P78357 1384 aa18.3■□□□□ 0.52
LINC00116-201ENST00000414416 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
LINC00116-201ENST00000414416 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
LINC00116-201ENST00000414416 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
LINC00116-201ENST00000414416 RASA3Q14644 834 aa18.29■□□□□ 0.52
LINC00116-201ENST00000414416 NECTIN1Q15223 517 aa18.29■□□□□ 0.52
LINC00116-201ENST00000414416 IMMTQ16891 758 aaKnown RBP18.29■□□□□ 0.52
LINC00116-201ENST00000414416 SBK1Q52WX2 424 aa18.29■□□□□ 0.52
LINC00116-201ENST00000414416 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
LINC00116-201ENST00000414416 DHX36Q9H2U1 1008 aaKnown RBP18.29■□□□□ 0.52
LINC00116-201ENST00000414416 MYH1P12882 1939 aa18.29■□□□□ 0.52
LINC00116-201ENST00000414416 MINDY4BA8MYZ0 360 aa18.28■□□□□ 0.52
LINC00116-201ENST00000414416 ZNF213O14771 459 aa18.28■□□□□ 0.52
LINC00116-201ENST00000414416 MCCP23508 829 aa18.28■□□□□ 0.52
LINC00116-201ENST00000414416 TMEM39BQ9GZU3 492 aa18.28■□□□□ 0.52
LINC00116-201ENST00000414416 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
LINC00116-201ENST00000414416 HSPA4P34932 840 aa18.27■□□□□ 0.52
LINC00116-201ENST00000414416 RNF20Q5VTR2 975 aa18.27■□□□□ 0.52
LINC00116-201ENST00000414416 DEFB129Q9H1M3 183 aa18.27■□□□□ 0.52
LINC00116-201ENST00000414416 GPBP1L1Q9HC44 474 aaPredicted RBP18.27■□□□□ 0.52
LINC00116-201ENST00000414416 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
LINC00116-201ENST00000414416 COL2A1P02458 1487 aaPredicted RBP18.27■□□□□ 0.52
LINC00116-201ENST00000414416 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 DDTLA6NHG4 134 aaPredicted RBP18.27■□□□□ 0.51
LINC00116-201ENST00000414416 HLA-DOAP06340 250 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 CYP2D6P10635 497 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 HAND2P61296 217 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 PPARAQ07869 468 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 C12orf60Q5U649 245 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 CREB3L3Q68CJ9 461 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 SH3BP5LQ7L8J4 393 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 TTC6Q86TZ1 520 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 SULF1Q8IWU6 871 aa18.27■□□□□ 0.51
LINC00116-201ENST00000414416 SLC27A2O14975 620 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 CYP21A2P08686 494 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 POTEIP0CG38 1075 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 POTEJP0CG39 1038 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 PLCD1P51178 756 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 PPP2R3BQ9Y5P8 575 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 ATRNL1Q5VV63 1379 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 KRT26Q7Z3Y9 468 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 CSRNP1Q96S65 589 aa18.26■□□□□ 0.51
LINC00116-201ENST00000414416 LAMB1P07942 1786 aa18.25■□□□□ 0.51
LINC00116-201ENST00000414416 ZKSCAN1P17029 563 aaPredicted RBP18.25■□□□□ 0.51
LINC00116-201ENST00000414416 EVX2Q03828 476 aa18.25■□□□□ 0.51
LINC00116-201ENST00000414416 PI4KBQ9UBF8 816 aa18.25■□□□□ 0.51
LINC00116-201ENST00000414416 ANAPC4Q9UJX5 808 aa18.25■□□□□ 0.51
LINC00116-201ENST00000414416 POLR2AP24928 1970 aaKnown RBP18.25■□□□□ 0.51
LINC00116-201ENST00000414416 LAMA4Q16363 1823 aa18.24■□□□□ 0.51
LINC00116-201ENST00000414416 YY1P25490 414 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms