RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 PICALMQ13492 652 aa25.36■■□□□ 1.65
LMBR1-203ENST00000414218 RAI14Q9P0K7 980 aa25.36■■□□□ 1.65
LMBR1-203ENST00000414218 GSTO1P78417 241 aa25.35■■□□□ 1.65
LMBR1-203ENST00000414218 CAP1Q01518 475 aa25.35■■□□□ 1.65
LMBR1-203ENST00000414218 NOL9Q5SY16 702 aaKnown RBP25.35■■□□□ 1.65
LMBR1-203ENST00000414218 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.35■■□□□ 1.65
LMBR1-203ENST00000414218 PANK1Q8TE04 598 aa25.35■■□□□ 1.65
LMBR1-203ENST00000414218 NSUN4Q96CB9 384 aaKnown RBP25.35■■□□□ 1.65
LMBR1-203ENST00000414218 DBNDD2Q9BQY9 259 aa25.35■■□□□ 1.65
LMBR1-203ENST00000414218 SNRKQ9NRH2 765 aa25.35■■□□□ 1.65
LMBR1-203ENST00000414218 ATRNL1Q5VV63 1379 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 DDTLA6NHG4 134 aaPredicted RBP25.34■■□□□ 1.65
LMBR1-203ENST00000414218 LDHCP07864 332 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 RHBDL3P58872 404 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 TTC39AQ5SRH9 613 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 EFCC1Q9HA90 598 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 LRP2BPQ9P2M1 347 aa25.34■■□□□ 1.65
LMBR1-203ENST00000414218 NOP58Q9Y2X3 529 aaKnown RBP25.34■■□□□ 1.65
LMBR1-203ENST00000414218 PHF20L1A8MW92 1017 aa25.33■■□□□ 1.65
LMBR1-203ENST00000414218 ZCCHC17Q9NP64 241 aaKnown RBP25.33■■□□□ 1.65
LMBR1-203ENST00000414218 SLURP2P0DP57 97 aa25.32■■□□□ 1.64
LMBR1-203ENST00000414218 CCDC158Q5M9N0 1113 aa25.32■■□□□ 1.64
LMBR1-203ENST00000414218 KCNH4Q9UQ05 1017 aa25.32■■□□□ 1.64
LMBR1-203ENST00000414218 PTPN22Q9Y2R2 807 aa25.32■■□□□ 1.64
LMBR1-203ENST00000414218 CEP85Q6P2H3 762 aa25.31■■□□□ 1.64
LMBR1-203ENST00000414218 TLR2O60603 784 aa25.3■■□□□ 1.64
LMBR1-203ENST00000414218 MAP3K10Q02779 954 aa25.3■■□□□ 1.64
LMBR1-203ENST00000414218 SCYL3Q8IZE3 742 aa25.29■■□□□ 1.64
LMBR1-203ENST00000414218 CCDC8Q9H0W5 538 aaPredicted RBP25.29■■□□□ 1.64
LMBR1-203ENST00000414218 PICK1Q9NRD5 415 aa25.29■■□□□ 1.64
LMBR1-203ENST00000414218 TNRC18O15417 2968 aaPredicted RBP25.29■■□□□ 1.64
LMBR1-203ENST00000414218 NPM3O75607 178 aaKnown RBP25.28■■□□□ 1.64
LMBR1-203ENST00000414218 MAP4K4O95819 1239 aaPredicted RBP25.28■■□□□ 1.64
LMBR1-203ENST00000414218 MOGSQ13724 837 aa25.28■■□□□ 1.64
LMBR1-203ENST00000414218 ANKRD23Q86SG2 305 aa25.28■■□□□ 1.64
LMBR1-203ENST00000414218 TLR7Q9NYK1 1049 aaKnown RBP25.28■■□□□ 1.64
LMBR1-203ENST00000414218 DBNLQ9UJU6 430 aaKnown RBP25.28■■□□□ 1.64
LMBR1-203ENST00000414218 PDHXO00330 501 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 CXCL11O14625 94 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 CYP2E1P05181 493 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-203ENST00000414218 PTPRAP18433 802 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 ARHGEF6Q15052 776 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 NAA16Q6N069 864 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-203ENST00000414218 TEX11Q8IYF3 940 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 EAF2Q96CJ1 260 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-203ENST00000414218 ZNF512BQ96KM6 892 aaPredicted RBP25.27■■□□□ 1.64
LMBR1-203ENST00000414218 ZHX2Q9Y6X8 837 aa25.27■■□□□ 1.64
LMBR1-203ENST00000414218 ZAP70P43403 619 aa25.26■■□□□ 1.63
LMBR1-203ENST00000414218 SH3RF3Q8TEJ3 882 aaPredicted RBP25.26■■□□□ 1.63
LMBR1-203ENST00000414218 NOL10Q9BSC4 688 aaKnown RBP25.26■■□□□ 1.63
LMBR1-203ENST00000414218 MYO5AQ9Y4I1 1855 aaKnown RBP25.26■■□□□ 1.63
LMBR1-203ENST00000414218 CTNND1O60716 968 aaKnown RBP25.25■■□□□ 1.63
LMBR1-203ENST00000414218 MS4A1P11836 297 aa25.25■■□□□ 1.63
LMBR1-203ENST00000414218 OSBPL5Q9H0X9 879 aaPredicted RBP25.25■■□□□ 1.63
LMBR1-203ENST00000414218 EXOC6BQ9Y2D4 811 aa25.25■■□□□ 1.63
LMBR1-203ENST00000414218 DOCK1Q14185 1865 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 ZSWIM8A7E2V4 1837 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 FAM196BA6NMK8 535 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 TBC1D12O60347 775 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 LACTBP83111 547 aaPredicted RBP25.24■■□□□ 1.63
LMBR1-203ENST00000414218 C17orf99Q6UX52 265 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 ARHGAP39Q9C0H5 1083 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.24■■□□□ 1.639e-7■■□□□ 13
LMBR1-203ENST00000414218 PIH1D3Q9NQM4 214 aaKnown RBP25.24■■□□□ 1.63
LMBR1-203ENST00000414218 AATFQ9NY61 560 aaKnown RBP eCLIP25.24■■□□□ 1.63
LMBR1-203ENST00000414218 CPA4Q9UI42 421 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 AFG3L2Q9Y4W6 797 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 HTTP42858 3142 aa25.24■■□□□ 1.63
LMBR1-203ENST00000414218 KIF22Q14807 665 aa25.23■■□□□ 1.63
LMBR1-203ENST00000414218 GPAT2Q6NUI2 795 aa25.23■■□□□ 1.63
LMBR1-203ENST00000414218 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.23■■□□□ 1.63
LMBR1-203ENST00000414218 MAST2Q6P0Q8 1798 aa25.23■■□□□ 1.63
LMBR1-203ENST00000414218 ECM2O94769 699 aaPredicted RBP25.22■■□□□ 1.63
LMBR1-203ENST00000414218 BAG3O95817 575 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 ADGRA1Q86SQ6 560 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 ERC1Q8IUD2 1116 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 ARMC5Q96C12 935 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 COG6Q9Y2V7 657 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 PTCH2Q9Y6C5 1203 aa25.22■■□□□ 1.63
LMBR1-203ENST00000414218 COL2A1P02458 1487 aaPredicted RBP25.21■■□□□ 1.63
LMBR1-203ENST00000414218 PHIPQ8WWQ0 1821 aa25.21■■□□□ 1.63
LMBR1-203ENST00000414218 A0A0G2JLL6 359 aaPredicted RBP25.21■■□□□ 1.63
LMBR1-203ENST00000414218 PPP4CP60510 307 aa25.21■■□□□ 1.63
LMBR1-203ENST00000414218 GADL1Q6ZQY3 521 aa25.21■■□□□ 1.63
LMBR1-203ENST00000414218 FASTKD5Q7L8L6 764 aaKnown RBP25.21■■□□□ 1.63
LMBR1-203ENST00000414218 PRRT2Q7Z6L0 340 aaPredicted RBP25.21■■□□□ 1.63
LMBR1-203ENST00000414218 CCDC84Q86UT8 332 aaPredicted RBP25.21■■□□□ 1.63
LMBR1-203ENST00000414218 ADGRA2Q96PE1 1338 aa25.2■■□□□ 1.62
LMBR1-203ENST00000414218 PLCG2P16885 1265 aa25.2■■□□□ 1.62
LMBR1-203ENST00000414218 AACSQ86V21 672 aa25.2■■□□□ 1.62
LMBR1-203ENST00000414218 RCAN3Q9UKA8 241 aa25.2■■□□□ 1.62
LMBR1-203ENST00000414218 POTEFA5A3E0 1075 aa25.19■■□□□ 1.62
LMBR1-203ENST00000414218 TRIM75PA6NK02 468 aa25.19■■□□□ 1.62
LMBR1-203ENST00000414218 TGFBRAP1Q8WUH2 860 aa25.19■■□□□ 1.62
LMBR1-203ENST00000414218 PARK7Q99497 189 aaKnown RBP25.19■■□□□ 1.62
LMBR1-203ENST00000414218 NDUFB9Q9Y6M9 179 aa25.19■■□□□ 1.62
LMBR1-203ENST00000414218 PTPRFP10586 1907 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 CDK5RAP2Q96SN8 1893 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 CYP2C8P10632 490 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 CYP7A1P22680 504 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms