RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 HPS5Q9UPZ3 1129 aa20.61■□□□□ 0.89
SCAMP4-204ENST00000414057 SURF6O75683 361 aaKnown RBP20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 ARID4AP29374 1257 aaPredicted RBP20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 PPATQ06203 517 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 PPIL2Q13356 520 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 SNAPC2Q13487 334 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 CCDC158Q5M9N0 1113 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 CNKSR2Q8WXI2 1034 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 ZFYVE28Q9HCC9 887 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 HMG20BQ9P0W2 317 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
SCAMP4-204ENST00000414057 RAB11FIP3O75154 756 aa20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 MAP4K4O95819 1239 aaPredicted RBP20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 ARHGEF6Q15052 776 aa20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 BRI3BPQ8WY22 251 aa20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 ZCCHC17Q9NP64 241 aaKnown RBP20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 ZNF112Q9UJU3 913 aa20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 LAMB1P07942 1786 aa20.59■□□□□ 0.89
SCAMP4-204ENST00000414057 BTDP43251 543 aa20.58■□□□□ 0.89
SCAMP4-204ENST00000414057 SP3Q02447 781 aa20.58■□□□□ 0.89
SCAMP4-204ENST00000414057 MECOMQ03112 1051 aa20.58■□□□□ 0.89
SCAMP4-204ENST00000414057 TAF1CQ15572 869 aaPredicted RBP20.58■□□□□ 0.89
SCAMP4-204ENST00000414057 OTOFQ9HC10 1997 aa20.58■□□□□ 0.89
SCAMP4-204ENST00000414057 MROH7-TTC4A0A0A0MT08 1334 aa20.58■□□□□ 0.88
SCAMP4-204ENST00000414057 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 ZSCAN29Q8IWY8 852 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 NOP58Q9Y2X3 529 aaKnown RBP20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 TRIM17Q9Y577 477 aa20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
SCAMP4-204ENST00000414057 GPR75-ASB3A0A0A6YYF3 556 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 IRF6O14896 467 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 RAI14Q9P0K7 980 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 LRP2BPQ9P2M1 347 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 IGSF3O75054 1194 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 INPP5BP32019 993 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 NOL9Q5SY16 702 aaKnown RBP20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 SKAP1Q86WV1 359 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 LRRCC1Q9C099 1032 aa20.56■□□□□ 0.88
SCAMP4-204ENST00000414057 OTOP1Q7RTM1 612 aa20.55■□□□□ 0.88
SCAMP4-204ENST00000414057 NSUN4Q96CB9 384 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-204ENST00000414057 NOL10Q9BSC4 688 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-204ENST00000414057 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 PDE4AP27815 886 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 MCAMP43121 646 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 SOX10P56693 466 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 PICALMQ13492 652 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 ERC1Q8IUD2 1116 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 ZFPM1Q8IX07 1006 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 FAM43AQ8N2R8 423 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 EXOC6BQ9Y2D4 811 aa20.54■□□□□ 0.88
SCAMP4-204ENST00000414057 PI16Q6UXB8 463 aa20.53■□□□□ 0.88
SCAMP4-204ENST00000414057 TBC1D9Q6ZT07 1266 aa20.53■□□□□ 0.88
SCAMP4-204ENST00000414057 CD99L2Q8TCZ2 262 aa20.53■□□□□ 0.88
SCAMP4-204ENST00000414057 BAG3O95817 575 aa20.52■□□□□ 0.88
SCAMP4-204ENST00000414057 KIF1BPQ96EK5 621 aa20.52■□□□□ 0.88
SCAMP4-204ENST00000414057 DBNDD2Q9BQY9 259 aa20.52■□□□□ 0.88
SCAMP4-204ENST00000414057 PICK1Q9NRD5 415 aa20.52■□□□□ 0.88
SCAMP4-204ENST00000414057 RFX7Q2KHR2 1363 aa20.52■□□□□ 0.88
SCAMP4-204ENST00000414057 MYH2Q9UKX2 1941 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 BTBD19C9JJ37 291 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 TLR2O60603 784 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 MAP3K10Q02779 954 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 SCYL3Q8IZE3 742 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 KCNH4Q9UQ05 1017 aa20.51■□□□□ 0.87
SCAMP4-204ENST00000414057 CXCL11O14625 94 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 RHBDL3P58872 404 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 KIF22Q14807 665 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 NAA16Q6N069 864 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 DDX4Q9NQI0 724 aaKnown RBP20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 PTPN22Q9Y2R2 807 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 ATRNL1Q5VV63 1379 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 DDTLA6NHG4 134 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 TBC1D12O60347 775 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 PLCG2P16885 1265 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 SH3BP5LQ7L8J4 393 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 ZNF384Q8TF68 577 aa20.5■□□□□ 0.87
SCAMP4-204ENST00000414057 AK9Q5TCS8 1911 aa20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 PHF20L1A8MW92 1017 aa20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 CTNND1O60716 968 aaKnown RBP20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 RHPN1Q8TCX5 695 aa20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 SNRKQ9NRH2 765 aa20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 ZHX2Q9Y6X8 837 aa20.49■□□□□ 0.87
SCAMP4-204ENST00000414057 FASTKD5Q7L8L6 764 aaKnown RBP20.48■□□□□ 0.87
SCAMP4-204ENST00000414057 APBB1O00213 710 aa20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 GNRH1P01148 92 aa20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 TEX11Q8IYF3 940 aa20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 OSBPL5Q9H0X9 879 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 TSHZ2Q9NRE2 1034 aa20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 DBNLQ9UJU6 430 aaKnown RBP20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 COL2A1P02458 1487 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-204ENST00000414057 PDHXO00330 501 aa20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 CYP2E1P05181 493 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-204ENST00000414057 PTPRAP18433 802 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms