RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 CCDC30Q5VVM6 783 aa13.93□□□□□ -0.18
CRIM1-202ENST00000413985 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
CRIM1-202ENST00000413985 LBHD1Q9BQE6 289 aaPredicted RBP13.93□□□□□ -0.18
CRIM1-202ENST00000413985 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
CRIM1-202ENST00000413985 PTPRAP18433 802 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 TREML2Q5T2D2 321 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 MAP3K21Q5TCX8 1036 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 LDHAL6AQ6ZMR3 332 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 FAM151AQ8WW52 585 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 CNNM1Q9NRU3 951 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 AFG3L2Q9Y4W6 797 aa13.92□□□□□ -0.18
CRIM1-202ENST00000413985 PHF20L1A8MW92 1017 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 CYP2B6P20813 491 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 FAM110CQ1W6H9 321 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 ZFPM1Q8IX07 1006 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 SCYL3Q8IZE3 742 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 RUNDC1Q96C34 613 aa13.91□□□□□ -0.18
CRIM1-202ENST00000413985 FRMPD3Q5JV73 1810 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 TRIM75PA6NK02 468 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 PEX10O60683 326 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 CCND3P30281 292 aaPredicted RBP13.9□□□□□ -0.18
CRIM1-202ENST00000413985 UBE4AQ14139 1066 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 LHX8Q68G74 356 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 LMBR1LQ6UX01 489 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 PUS3Q9BZE2 481 aaKnown RBP13.9□□□□□ -0.18
CRIM1-202ENST00000413985 FAM198AQ9UFP1 575 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 ATRNL1Q5VV63 1379 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 DNAH12Q6ZR08 3092 aa13.9□□□□□ -0.18
CRIM1-202ENST00000413985 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
CRIM1-202ENST00000413985 TAF7LQ5H9L4 462 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 CDC42EP5Q6NZY7 148 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
CRIM1-202ENST00000413985 SENP6Q9GZR1 1112 aaPredicted RBP13.89□□□□□ -0.19
CRIM1-202ENST00000413985 IFT57Q9NWB7 429 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 DOCK2Q92608 1830 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 DOCK1Q14185 1865 aa13.89□□□□□ -0.19
CRIM1-202ENST00000413985 CACNB2Q08289 660 aaPredicted RBP13.88□□□□□ -0.19
CRIM1-202ENST00000413985 GRIN2CQ14957 1233 aa13.88□□□□□ -0.19
CRIM1-202ENST00000413985 PICK1Q9NRD5 415 aa13.88□□□□□ -0.19
CRIM1-202ENST00000413985 FRAT2O75474 233 aaPredicted RBP13.87□□□□□ -0.19
CRIM1-202ENST00000413985 SMAD3P84022 425 aaKnown RBP13.87□□□□□ -0.19
CRIM1-202ENST00000413985 HHIPL2Q6UWX4 724 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 VPS37DQ86XT2 251 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 ADAMTS19Q8TE59 1207 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 MRIQ9BWK5 157 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 MYH16Q9H6N6 1097 aa13.87□□□□□ -0.19
CRIM1-202ENST00000413985 GNAI1P63096 354 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 DIXDC1Q155Q3 683 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 CCL14Q16627 93 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 CCDC57Q2TAC2 916 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 PPM1EQ8WY54 764 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 DAGLAQ9Y4D2 1042 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 LOC285556D6RIA3 1793 aa13.86□□□□□ -0.19
CRIM1-202ENST00000413985 RTP1P59025 263 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 SH3BP5LQ7L8J4 393 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 LINS1Q8NG48 757 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 DNAAF4Q8WXU2 420 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 BADQ92934 168 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 MAST3O60307 1309 aa13.85□□□□□ -0.19
CRIM1-202ENST00000413985 SLC4A2P04920 1241 aa13.84□□□□□ -0.19
CRIM1-202ENST00000413985 NECAB3Q96P71 396 aaPredicted RBP13.84□□□□□ -0.19
CRIM1-202ENST00000413985 UHRF1Q96T88 793 aaPredicted RBP13.84□□□□□ -0.19
CRIM1-202ENST00000413985 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
CRIM1-202ENST00000413985 PNMA3Q9UL41 463 aa13.84□□□□□ -0.19
CRIM1-202ENST00000413985 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
CRIM1-202ENST00000413985 ZKSCAN1P17029 563 aaPredicted RBP13.83□□□□□ -0.2
CRIM1-202ENST00000413985 FLIIQ13045 1269 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 TSR2Q969E8 191 aaKnown RBP13.83□□□□□ -0.2
CRIM1-202ENST00000413985 ASB2Q96Q27 587 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 ASCC2Q9H1I8 757 aaPredicted RBP13.83□□□□□ -0.2
CRIM1-202ENST00000413985 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
CRIM1-202ENST00000413985 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.2
CRIM1-202ENST00000413985 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 PRKAG2Q9UGJ0 569 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 ATP11BQ9Y2G3 1177 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
CRIM1-202ENST00000413985 GCLCP48506 637 aaPredicted RBP13.82□□□□□ -0.2
CRIM1-202ENST00000413985 FKBP5Q13451 457 aaPredicted RBP13.82□□□□□ -0.2
CRIM1-202ENST00000413985 SH3RF1Q7Z6J0 888 aa13.82□□□□□ -0.2
CRIM1-202ENST00000413985 NUDT12Q9BQG2 462 aa13.82□□□□□ -0.2
CRIM1-202ENST00000413985 TXNRD2Q9NNW7 524 aa13.82□□□□□ -0.2
CRIM1-202ENST00000413985 DDTLA6NHG4 134 aaPredicted RBP13.81□□□□□ -0.2
CRIM1-202ENST00000413985 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 F6X3S4 739 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 PRDX5P30044 214 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 RGS3P49796 1198 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 EPHB4P54760 987 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 HMGCS2P54868 508 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 LRRC24Q50LG9 513 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 CAVIN4Q5BKX8 364 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
CRIM1-202ENST00000413985 SUGT1Q9Y2Z0 365 aa13.81□□□□□ -0.2
CRIM1-202ENST00000413985 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
CRIM1-202ENST00000413985 RLFQ13129 1914 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms